RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 POLR3GO15318 223 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 DRD2P14416 443 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 DDCP20711 480 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 PIK3R1P27986 724 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 MAPK1P28482 360 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 IDH3AP50213 366 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 XKP51811 444 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 IGLV3-21P80748 117 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 DUSP2Q05923 314 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 RAPSNQ13702 412 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 LRRC34Q8IZ02 419 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 KRTCAP2Q8N6L1 136 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 CNRIP1Q96F85 164 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 MAELQ96JY0 434 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 CATSPER2Q96P56 530 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 CCDC134Q9H6E4 229 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 MIEF1Q9NQG6 463 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 NOP53Q9NZM5 478 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 HPP00738 406 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 ALOX15P16050 662 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 TNNI3P19429 210 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 CCL11P51671 97 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 NME5P56597 212 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 SERTAD2Q14140 314 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 LSM12Q3MHD2 195 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 BORAQ6PGQ7 559 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 PTPMT1Q8WUK0 201 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 APOBEC4Q8WW27 367 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 IMMP1LQ96LU5 166 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 FER1L6-AS2Q96M78 137 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 DGAT2Q96PD7 388 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 LPAR4Q99677 370 aa16.72■□□□□ 0.27
PDLIM7-202ENST00000355841 A0A1W2PQ72 361 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 PCDH17O14917 1159 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 OR10H2O60403 315 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 GSTM5P46439 218 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 PGDP52209 483 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 MAD2L1Q13257 205 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 BTBD16Q32M84 506 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 CGB2Q6NT52 195 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 IKBIPQ70UQ0 350 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 TMEM102Q8N9M5 508 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 CLEC1AQ8NC01 280 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 RBM18Q96H35 190 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 ADAP2Q9NPF8 381 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 CLCA3PQ9Y6N3 262 aa16.71■□□□□ 0.27
PDLIM7-202ENST00000355841 MED13Q9UHV7 2174 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 SAGE2PA6NJ88 616 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 C17orf105B2RV13 164 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 HRKO00198 91 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 TGDSO95455 350 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 PRPS2P11908 318 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 CPMP14384 443 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 STT3AP46977 705 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 PLIN5Q00G26 463 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ELAVL1Q15717 326 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 SMU1Q2TAY7 513 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF385BQ569K4 471 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 OGFOD2Q6N063 350 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF321PQ8N8H1 164 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 OR7A2PQ8NGA2 310 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ACTRT2Q8TDY3 377 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 VPS50Q96JG6 964 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF681Q96N22 645 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF317Q96PQ6 595 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 TUBB6Q9BUF5 446 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 REEP4Q9H6H4 257 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ATP13A2Q9NQ11 1180 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 SLC35C2Q9NQQ7 365 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ASIC5Q9NY37 505 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 PSME2Q9UL46 239 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 ZNF780BQ9Y6R6 833 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 CACNA1BQ00975 2339 aa16.7■□□□□ 0.26
PDLIM7-202ENST00000355841 A0A0G2JND7 137 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 GABRR3A8MPY1 467 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 E9PBE3 544 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 KLHL41O60662 606 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 SLC35E2P0CK97 266 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 PORP16435 677 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 ITGA3P26006 1051 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 ASMTP46597 345 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 RRADP55042 308 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 SLC26A5P58743 744 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 ACAD11Q709F0 780 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 CCDC116Q8IYX3 515 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 ST13P4Q8IZP2 240 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 KIF2BQ8N4N8 673 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 NFAM1Q8NET5 270 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 ADCY4Q8NFM4 1077 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 CEP70Q8NHQ1 597 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 CIDECQ96AQ7 238 aaPredicted RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 THOC3Q96J01 351 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 OR8D2Q9GZM6 311 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 KCNK13Q9HB14 408 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 TCF7L2Q9NQB0 619 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 EHD3Q9NZN3 535 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 SH3BP4Q9P0V3 963 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 WBP11Q9Y2W2 641 aaKnown RBP16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 BOD1L1Q8NFC6 3051 aa16.69■□□□□ 0.26
PDLIM7-202ENST00000355841 C9JVG2 144 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms