RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 DMWDQ09019 674 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 RFX4Q33E94 735 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 C6orf132Q5T0Z8 1188 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 MAL2Q969L2 176 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 CYR61O00622 381 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 MSL3P1P0C860 447 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 GIMD1P0DJR0 217 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 ST6GAL1P15907 406 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 CD247P20963 164 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 FPR1P21462 350 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 MAOBP27338 520 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 GPR3P46089 330 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 PRIM2P49643 509 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 KHKP50053 298 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 GTF2A1P52655 376 aaPredicted RBP16.23■□□□□ 0.19
VPS13B-201ENST00000355155 VLDLRP98155 873 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 MYBPC1Q00872 1141 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 DUSP2Q05923 314 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 TCEA2Q15560 299 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 GARNL3Q5VVW2 1013 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 CEACAM20Q6UY09 585 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 CSNK1A1LQ8N752 337 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 OR5AK3PQ8NH89 298 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 SLC35G5Q96KT7 338 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 BBS4Q96RK4 519 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 YTHDF1Q9BYJ9 559 aaKnown RBP16.23■□□□□ 0.19
VPS13B-201ENST00000355155 FBXW2Q9UKT8 454 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 MAP4K5Q9Y4K4 846 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 TRIM64CA6NLI5 447 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 DCNP07585 359 aaKnown RBP16.23■□□□□ 0.19
VPS13B-201ENST00000355155 ZNF23P17027 643 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 DNAJA1P31689 397 aaKnown RBP16.23■□□□□ 0.19
VPS13B-201ENST00000355155 IFI44LQ53G44 452 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 ZNF605Q86T29 641 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 CA13Q8N1Q1 262 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 DEFB119Q8N690 84 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 ADAMTS18Q8TE60 1221 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 HOXB13Q92826 284 aaPredicted RBP16.23■□□□□ 0.19
VPS13B-201ENST00000355155 GIMAP5Q96F15 307 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 BTBD2Q9BX70 525 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 PNPLA3Q9NST1 481 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 C5AR2Q9P296 337 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 V9GYQ6 96 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 TLCD2A6NGC4 264 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 NUDT21O43809 227 aaKnown RBP16.22■□□□□ 0.19
VPS13B-201ENST00000355155 SH3BP5O60239 455 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 TNFAIP8O95379 198 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 C9P02748 559 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 PVRP15151 417 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 C21orf59P57076 290 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 RAB38P57729 211 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 HSPB3Q12988 150 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 SQSTM1Q13501 440 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 SHBQ15464 509 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 SLC38A5Q8WUX1 472 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 RASSF5Q8WWW0 418 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 N4BP2L2Q92802 583 aaPredicted RBP16.22■□□□□ 0.19
VPS13B-201ENST00000355155 ELP4Q96EB1 424 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 VNN3Q9NY84 501 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 ABCG2Q9UNQ0 655 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 GPC6Q9Y625 555 aaPredicted RBP16.22■□□□□ 0.19
VPS13B-201ENST00000355155 ZNF780BQ9Y6R6 833 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 ADAMTS20P59510 1910 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 A0A087WV62 115 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 A0A1B0GTW7 788 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 DNAJB5O75953 348 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 ZNF682O95780 498 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 RECKO95980 971 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 MT-ND1P03886 318 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 TLX1P31314 330 aaPredicted RBP16.22■□□□□ 0.19
VPS13B-201ENST00000355155 HMGA2P52926 109 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 PPP1CAP62136 330 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 SIGLEC14Q08ET2 396 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 APOFQ13790 326 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 FHL5Q5TD97 284 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 PMS2CLQ68D20 193 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 TMEM154Q6P9G4 183 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 TMEM179BQ7Z7N9 219 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 ZNF675Q8TD23 568 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 GEMIN6Q8WXD5 167 aaKnown RBP16.22■□□□□ 0.19
VPS13B-201ENST00000355155 LZICQ8WZA0 190 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 TANKQ92844 425 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 FAM60AQ9NP50 221 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 GIN1Q9NXP7 522 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 PTGFRNQ9P2B2 879 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 P2RX2Q9UBL9 471 aa16.22■□□□□ 0.19
VPS13B-201ENST00000355155 TRIOBPQ9H2D6 2365 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 DSPPQ9NZW4 1301 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 MFN2O95140 757 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 ATP1B1P05026 303 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 GUSBP08236 651 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 SMIM18P0DKX4 95 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 ITGAMP11215 1152 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 PNLIPP16233 465 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 CPN2P22792 545 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 GCGRP47871 477 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 LIMS1P48059 325 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 FAM53BQ14153 422 aa16.21■□□□□ 0.19
VPS13B-201ENST00000355155 GNA13Q14344 377 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms