RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 ITFG2Q969R8 447 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 SEMA6CQ9H3T2 930 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 COMMD3-BMI1R4GMX3 469 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 GOLGA4Q13439 2230 aaKnown RBP17.47■□□□□ 0.39
TRIM41-202ENST00000351937 ALBP02768 609 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 NR2F6P10588 404 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 THRBP10828 461 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 TYRP1P17643 537 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 CSNK2A2P19784 350 aaPredicted RBP17.47■□□□□ 0.39
TRIM41-202ENST00000351937 BUD31P41223 144 aaPredicted RBP17.47■□□□□ 0.39
TRIM41-202ENST00000351937 ARHGDIAP52565 204 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 NXPH1P58417 271 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 ADARB1P78563 741 aaKnown RBP17.47■□□□□ 0.39
TRIM41-202ENST00000351937 DGLUCYQ7Z3D6 616 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 TMEM179BQ7Z7N9 219 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 PATL1Q86TB9 770 aaKnown RBP17.47■□□□□ 0.39
TRIM41-202ENST00000351937 SUN3Q8TAQ9 357 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 TAMM41Q96BW9 452 aa17.47■□□□□ 0.39
TRIM41-202ENST00000351937 K7ESF4 209 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 PRAMEF10O60809 474 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 GNAO1P09471 354 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 MPIP34949 423 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 MAZP56270 477 aaKnown RBP17.46■□□□□ 0.39
TRIM41-202ENST00000351937 RPS26P62854 115 aaKnown RBP17.46■□□□□ 0.39
TRIM41-202ENST00000351937 EPS8Q12929 822 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 TP53BP2Q13625 1128 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 IQCCQ4KMZ1 466 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 DEFB134Q4QY38 66 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 TNFAIP8L2Q6P589 184 aaPredicted RBP17.46■□□□□ 0.39
TRIM41-202ENST00000351937 BHLHB9Q6PI77 547 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 ZNF438Q7Z4V0 828 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 SDR16C5Q8N3Y7 309 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 ZCCHC10Q8TBK6 192 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 PRDM9Q9NQV7 894 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 PRDM6Q9NQX0 595 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 KCMF1Q9P0J7 381 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 ZNF780BQ9Y6R6 833 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 U3KQV3 271 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 B3GALT2O43825 422 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 UBXN7O94888 489 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 H6PDO95479 791 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 ITGA1P56199 1179 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 HNRNPKP61978 463 aaKnown RBP eCLIP17.46■□□□□ 0.393e-7■■■■□ 24
TRIM41-202ENST00000351937 PPP1CAP62136 330 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 CCDC116Q8IYX3 515 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 HS3ST5Q8IZT8 346 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 TSPAN14Q8NG11 270 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 SFXN5Q8TD22 340 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 SLC38A5Q8WUX1 472 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 MOAP1Q96BY2 351 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 SMURF2Q9HAU4 748 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 MS4A12Q9NXJ0 267 aa17.46■□□□□ 0.39
TRIM41-202ENST00000351937 C5orf58C9J3I9 102 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 H3BNH8 94 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 TFPTP0C1Z6 253 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 ALOX12P18054 663 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 DNAJA1P31689 397 aaKnown RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 TNFRSF17Q02223 184 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 DNASE2BQ8WZ79 361 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 NRBF2Q96F24 287 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 ZNF681Q96N22 645 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 RBM38Q9H0Z9 239 aaKnown RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 ZCCHC3Q9NUD5 404 aaKnown RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 VNN3Q9NY84 501 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 ZNF451Q9Y4E5 1061 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 HMGN4O00479 90 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 AQP9O43315 295 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 OPN1SWP03999 348 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 EIF2S1P05198 315 aaKnown RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 DCNP07585 359 aaKnown RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 CPN2P22792 545 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 SNRPNP63162 240 aaKnown RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 PPP1R8Q12972 351 aaKnown RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 IFI44LQ53G44 452 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 USP51Q70EK9 711 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 TMEFF1Q8IYR6 380 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 KLHL6Q8WZ60 621 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 SLC35G5Q96KT7 338 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 IER2Q9BTL4 223 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 GABARAPL1Q9H0R8 117 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 DAPP1Q9UN19 280 aa17.45■□□□□ 0.38
TRIM41-202ENST00000351937 TDRD6O60522 2096 aaKnown RBP17.45■□□□□ 0.38
TRIM41-202ENST00000351937 BCKDHBP21953 392 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 TLX1P31314 330 aaPredicted RBP17.44■□□□□ 0.38
TRIM41-202ENST00000351937 FEN1P39748 380 aaKnown RBP17.44■□□□□ 0.38
TRIM41-202ENST00000351937 NR1H2P55055 460 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 LIM2P55344 173 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 LSAMPQ13449 338 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 C17orf82Q86X59 251 aaPredicted RBP17.44■□□□□ 0.38
TRIM41-202ENST00000351937 SAMD14Q8IZD0 417 aaPredicted RBP17.44■□□□□ 0.38
TRIM41-202ENST00000351937 SPPL2AQ8TCT8 520 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 FBXL20Q96IG2 436 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 LYRM4Q9HD34 91 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 MYRFQ9Y2G1 1151 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 LMO7DNF2Z398 122 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 FPR1P21462 350 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 RUNX2Q13950 521 aa17.44■□□□□ 0.38
TRIM41-202ENST00000351937 ZNF750Q32MQ0 723 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms