RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ZIK1Q3SY52 487 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 IFI44LQ53G44 452 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 MANEAQ5SRI9 462 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 C18orf63Q68DL7 685 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 REEP3Q6NUK4 255 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 FAM180BQ6P0A1 224 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CEACAM20Q6UY09 585 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 TAF8Q7Z7C8 310 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 C17orf82Q86X59 251 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 ARMC8Q8IUR7 673 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 SFTPA2Q8IWL1 248 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 TRIM48Q8IWZ4 208 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 FAM160A2Q8N612 972 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 KCT2Q8NC54 265 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CAMKVQ8NCB2 501 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 TSPAN14Q8NG11 270 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 SLC38A5Q8WUX1 472 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 RLN3Q8WXF3 142 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 NCSTNQ92542 709 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CLDN23Q96B33 292 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 CNRIP1Q96F85 164 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 SHDQ96IW2 340 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 MUS81Q96NY9 551 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 FCRL4Q96PJ5 515 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 SERINC2Q96SA4 455 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF347Q96SE7 839 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 MAPKAP1Q9BPZ7 522 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 LRRC61Q9BV99 259 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 RSPO3Q9BXY4 272 aaPredicted RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 RBM38Q9H0Z9 239 aaKnown RBP6.54□□□□□ -1.36
TRIM55-203ENST00000350034 UCK1Q9HA47 277 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 NTMQ9P121 344 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 C3orf18Q9UK00 162 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 PCDHGB3Q9Y5G1 929 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 LRP4O75096 1905 aa6.54□□□□□ -1.36
TRIM55-203ENST00000350034 A0A087WXM4 84 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 LOC105369274A0A096LPK9 316 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 LOC102723532A0A0G2JNH3 316 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 A0A0J9YVX5 310 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 GSAPA4D1B5 854 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 OR5K3A6NET4 321 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 A8MVJ9 347 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 H0YGG7 62 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 HMGN4O00479 90 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ADAMDEC1O15204 470 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PRAMEF10O60809 474 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 MITFO75030 526 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 JRKO75564 520 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PRKRAO75569 313 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 DNAJB5O75953 348 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 DIRAS1O95057 198 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PGM3O95394 542 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 OPN1SWP03999 348 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 IFI6P09912 130 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 SLC35G6P0C7Q6 338 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF888P0CJ79 500 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 NR2F6P10588 404 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 NELFEP18615 380 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 RYKP34925 604 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PIGAP37287 484 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 XCR1P46094 333 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ID4P47928 161 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 FASLGP48023 281 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 LIMS1P48059 325 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PXNP49023 591 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 HLCSP50747 726 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 RPS6KA3P51812 740 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 NCBP2P52298 156 aaKnown RBP eCLIP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 RAD23AP54725 363 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ARF3P61204 181 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 RPS26P62854 115 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PPP1R8Q12972 351 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 RUNX2Q13950 521 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 UBXN2BQ14CS0 331 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 SKIV2LQ15477 1246 aaKnown RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 NADK2Q4G0N4 442 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF542PQ5EBM4 170 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PRAMEF8Q5VWM4 474 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PRAMEF7Q5VXH5 474 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 LAIR2Q6ISS4 152 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 TNFAIP8L2Q6P589 184 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 TTC33Q6PID6 262 aaPredicted RBP6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ANGPTL8Q6UXH0 198 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ISLR2Q6UXK2 745 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 THAP5Q7Z6K1 395 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF605Q86T29 641 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 SATL1Q86VE3 508 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 OFCC1Q8IZS5 231 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 OR4N4Q8N0Y3 316 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ZNF786Q8N393 782 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 SPEM1Q8N4L4 309 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ARHGEF39Q8N4T4 335 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 CAMKK1Q8N5S9 505 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 AVL9Q8NBF6 648 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 PIK3C3Q8NEB9 887 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 GPR32P1Q8NGA4 272 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 C1orf216Q8TAB5 229 aa6.53□□□□□ -1.36
TRIM55-203ENST00000350034 ZDHHC1Q8WTX9 485 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms