RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ST13P4Q8IZP2 240 aaPredicted RBP13.57□□□□□ -0.24
ERCC1-203ENST00000340192 C4orf33Q8N1A6 199 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 CYP4Z2PQ8N1L4 340 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 CCNYL1Q8N7R7 359 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 OR8K3Q8NH51 312 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 METTL6Q8TCB7 284 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 AENQ8WTP8 325 aaKnown RBP13.57□□□□□ -0.24
ERCC1-203ENST00000340192 SENP5Q96HI0 755 aaPredicted RBP13.57□□□□□ -0.24
ERCC1-203ENST00000340192 FRMD6Q96NE9 622 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 PSMG3-AS1Q96PY0 264 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 C12orf65Q9H3J6 166 aaKnown RBP13.57□□□□□ -0.24
ERCC1-203ENST00000340192 NMRK1Q9NWW6 199 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 SLC5A6Q9Y289 635 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 STK38LQ9Y2H1 464 aa13.57□□□□□ -0.24
ERCC1-203ENST00000340192 USP9YO00507 2555 aaPredicted RBP13.57□□□□□ -0.24
ERCC1-203ENST00000340192 ASPDHA6ND91 283 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 HRKO00198 91 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 UBFD1O14562 309 aaKnown RBP13.56□□□□□ -0.24
ERCC1-203ENST00000340192 DYRK3O43781 588 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 OR10H2O60403 315 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 ULK1O75385 1050 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 WISP2O76076 250 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 UNC5CO95185 931 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 IGKV3-11P04433 115 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 NUDT17P0C025 328 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 HMOX2P30519 316 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 HK2P52789 917 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 MAPK12P53778 367 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 CSTF3Q12996 717 aaKnown RBP13.56□□□□□ -0.24
ERCC1-203ENST00000340192 WDR93Q6P2C0 686 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 GFRALQ6UXV0 394 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 MDGA2Q7Z553 956 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 C1orf52Q8N6N3 182 aaKnown RBP13.56□□□□□ -0.24
ERCC1-203ENST00000340192 FAM98AQ8NCA5 519 aaKnown RBP13.56□□□□□ -0.24
ERCC1-203ENST00000340192 RDH11Q8TC12 318 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 DOK4Q8TEW6 326 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 ASB15Q8WXK1 588 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 FBXL20Q96IG2 436 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 KCNA7Q96RP8 456 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 RASL10BQ96S79 203 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 PELOQ9BRX2 385 aaKnown RBP13.56□□□□□ -0.24
ERCC1-203ENST00000340192 CNPPD1Q9BV87 410 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 VPS29Q9UBQ0 182 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 SEC14L3Q9UDX4 400 aa13.56□□□□□ -0.24
ERCC1-203ENST00000340192 POLEQ07864 2286 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 EML6Q6ZMW3 1958 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 A0A1W2PS29 197 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 A8MVJ9 347 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 ESPNB1AK53 854 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 LRRTM2O43300 516 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 OR6B1O95007 311 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 ESRRBO95718 433 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 ENO1P06733 434 aaKnown RBP13.55□□□□□ -0.24
ERCC1-203ENST00000340192 SLC35E2P0CK97 266 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 HSD3B1P14060 373 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 CPA3P15088 417 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 CHN1P15882 459 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 HSD3B2P26439 372 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 PIK3R1P27986 724 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 SOX3P41225 446 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 HTR6P50406 440 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 NAGLUP54802 743 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 ALDH6A1Q02252 535 aaKnown RBP13.55□□□□□ -0.24
ERCC1-203ENST00000340192 SLC18A2Q05940 514 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 IFFO1Q0D2I5 559 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 C4orf17Q53FE4 359 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 EMBQ6PCB8 327 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 IL20RBQ6UXL0 311 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 FRMD7Q6ZUT3 714 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 C9orf40Q8IXQ3 194 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 CPSF7Q8N684 471 aaKnown RBP13.55□□□□□ -0.24
ERCC1-203ENST00000340192 CCDC63Q8NA47 563 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 OR5L2Q8NGL0 311 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 AGAP11Q8TF27 550 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 RIT1Q92963 219 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 ART5Q96L15 291 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 ACPTQ9BZG2 426 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 TSPAN10Q9H1Z9 355 aaPredicted RBP13.55□□□□□ -0.24
ERCC1-203ENST00000340192 MID1IP1Q9NPA3 183 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 OXSMQ9NWU1 459 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 HPF1Q9NWY4 346 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 ERVK-11Q9UQG0 969 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 KLF13Q9Y2Y9 288 aaPredicted RBP13.55□□□□□ -0.24
ERCC1-203ENST00000340192 TIMM22Q9Y584 194 aa13.55□□□□□ -0.24
ERCC1-203ENST00000340192 CCDC151A5D8V7 595 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 WIPF3A6NGB9 483 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 GUCY1B2O75343 617 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 LDLRP01130 860 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 STSP08842 583 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 FOXA1P55317 472 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 DNAJB13P59910 316 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 NAA20P61599 178 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 ERVK-8P63133 956 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 ZNF267Q14586 743 aaPredicted RBP13.54□□□□□ -0.24
ERCC1-203ENST00000340192 SPRED3Q2MJR0 410 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 ERCC6LQ2NKX8 1250 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 CFAP157Q5JU67 520 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 SULF2Q8IWU5 870 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 GPALPP1Q8IXQ4 340 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 RIBC1Q8N443 379 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms