RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SVOPLQ8N434 492 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 OSBPL10Q9BXB5 764 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 KCMF1Q9P0J7 381 aa21.17■□□□□ 0.98
PDLIM2-203ENST00000339162 OR12D1P0DN82 309 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 ALOX12P18054 663 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 YAP1P46937 504 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 LIM2P55344 173 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 PPP2R2BQ00005 443 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 IQCCQ4KMZ1 466 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 ST13P4Q8IZP2 240 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 AVL9Q8NBF6 648 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 OR5T3Q8NGG3 340 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 OR9A2Q8NGT5 310 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 TMEM19Q96HH6 336 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 SERINC2Q96SA4 455 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 ANGPT4Q9Y264 503 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 SCN2AQ99250 2005 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 EML5Q05BV3 1969 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 URADA6NGE7 173 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 SLC9B1P1A6NJY1 282 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 B3GALT2O43825 422 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 HS6ST1O60243 411 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 TNFAIP8O95379 198 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 PGM3O95394 542 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 PDGFBP01127 241 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 THRBP10828 461 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 CSNK2A2P19784 350 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 CAPGP40121 348 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 PCBP3P57721 371 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 LTB4RQ15722 352 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 RNF220Q5VTB9 566 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 FAM92BQ6ZTR7 304 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 ABHD13Q7L211 337 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 OLIG3Q7RTU3 272 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 TSEN54Q7Z6J9 526 aaKnown RBP21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 UBALD2Q8IYN6 164 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 CSNK1A1LQ8N752 337 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 ZFP28Q8NHY6 868 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 THAP11Q96EK4 314 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 SLC38A3Q99624 504 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 CCDC3Q9BQI4 270 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 OR51I1Q9H343 314 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 SEMA6CQ9H3T2 930 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 PDP2Q9P2J9 529 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 TRPC4Q9UBN4 977 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 CEP192Q8TEP8 1941 aa21.16■□□□□ 0.98
PDLIM2-203ENST00000339162 PRAMEF25A6NGN4 478 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 C19orf67A6NJJ6 358 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 C5orf58C9J3I9 102 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 ALBP02768 609 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 TFPTP0C1Z6 253 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 SMIM18P0DKX4 95 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 FASLGP48023 281 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 HNRNPKP61978 463 aaKnown RBP eCLIP21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 MAPK11Q15759 364 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 REEP3Q6NUK4 255 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 CCDC80Q76M96 950 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 XAGE5Q8WWM1 108 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 COL26A1Q96A83 441 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 SLC35G5Q96KT7 338 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 C10orf90Q96M02 699 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 ZNF681Q96N22 645 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 MAP3K3Q99759 626 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 TOR3AQ9H497 397 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 DAPP1Q9UN19 280 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 ZNF780BQ9Y6R6 833 aa21.15■□□□□ 0.98
PDLIM2-203ENST00000339162 HOXB6P17509 224 aaKnown RBP21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 BUD31P41223 144 aaPredicted RBP21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 TNFRSF17Q02223 184 aa21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 CRB2Q5IJ48 1285 aa21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 SLC36A4Q6YBV0 504 aa21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 KAT2AQ92830 837 aa21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 RUBCNLQ9H714 662 aa21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 SH3GLB1Q9Y371 365 aa21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 SAMHD1Q9Y3Z3 626 aaKnown RBP21.14■□□□□ 0.98
PDLIM2-203ENST00000339162 PRAMEF27A3QJZ7 478 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 ATP6V1B1P15313 513 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 MYF6P23409 242 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 MPIP34949 423 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 MC3RP41968 323 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 ADARB1P78563 741 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 ID2Q02363 134 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 LASP1Q14847 261 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 MYBPC3Q14896 1274 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 SYPL1Q16563 259 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 DUSP7Q16829 419 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 RBM4BQ9BQ04 359 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 RBM4Q9BWF3 364 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 GIMAP4Q9NUV9 329 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 NAALAD2Q9Y3Q0 740 aa21.14■□□□□ 0.97
PDLIM2-203ENST00000339162 BCAT2O15382 392 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 ZSCAN9O15535 394 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 HMGN2P05204 90 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 MATN1P21941 496 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 C21orf59P57076 290 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 RELAQ04206 551 aa21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 SHQ1Q6PI26 577 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 C19orf47Q8N9M1 422 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 MAFAQ8NHW3 353 aaPredicted RBP21.13■□□□□ 0.97
PDLIM2-203ENST00000339162 DOK4Q8TEW6 326 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms