RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 WDR12Q9GZL7 423 aaKnown RBP13.8□□□□□ -0.2
TPM3-206ENST00000330188 KLHL31Q9H511 634 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 FBXO8Q9NRD0 319 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 DZANK1Q9NVP4 752 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 DSPPQ9NZW4 1301 aa13.8□□□□□ -0.2
TPM3-206ENST00000330188 EFCAB9A8MZ26 197 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 C4orf51C9J302 202 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 CBFA2T3O75081 653 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 STATHP02808 62 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 OR12D1P0DN82 309 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 DRD2P14416 443 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SERPINB10P48595 397 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 CDC42P60953 191 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 ATP1A4Q13733 1029 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SYPL1Q16563 259 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 FRMPD2BQ6IN97 320 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 STX19Q8N4C7 294 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 TTLQ8NG68 377 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 OR6Q1Q8NGQ2 317 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SNRNP27Q8WVK2 155 aaKnown RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 S100ZQ8WXG8 99 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SLC35G5Q96KT7 338 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 DHRS1Q96LJ7 313 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 AMDHD1Q96NU7 426 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 RAB11FIP5Q9BXF6 653 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 C1QTNF2Q9BXJ5 285 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 IGFLR1Q9H665 355 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 MS4A12Q9NXJ0 267 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 OSGIN1Q9UJX0 560 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 YBX2Q9Y2T7 364 aaKnown RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 MYO10Q9HD67 2058 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 OR52A4PA6NMU1 304 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 WASHC1A8K0Z3 465 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SLC28A2O43868 658 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 PRKRAO75569 313 aaKnown RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 ADAP00813 363 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 OCM2P0CE71 109 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 OCMP0CE72 109 aaPredicted RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 ADORA3P0DMS8 318 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 ELAVL4P26378 380 aaKnown RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 IGFALSP35858 605 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SOX9P48436 509 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 PSMD7P51665 324 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 RPS21P63220 83 aaKnown RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 ST3GAL4Q11206 333 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 HYAL2Q12891 473 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 IRF3Q14653 427 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SEC23BQ15437 767 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 C9orf50Q5SZB4 431 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 ZNF776Q68DI1 518 aaPredicted RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 WASH2PQ6VEQ5 465 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 NUDT18Q6ZVK8 323 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SLC46A3Q7Z3Q1 461 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 ZNF554Q86TJ5 538 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 RBM45Q8IUH3 476 aaKnown RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 MFSD4AQ8N468 514 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 OR52E1Q8NGJ3 308 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 OR5D16Q8NGK9 328 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 ZNF675Q8TD23 568 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 COL21A1Q96P44 957 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 ZNF607Q96SK3 696 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 WFDC6Q9BQY6 131 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SLIRPQ9GZT3 109 aaKnown RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 OR51I1Q9H343 314 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SLC6A20Q9NP91 592 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 MRPS30Q9NP92 439 aaKnown RBP13.79□□□□□ -0.2
TPM3-206ENST00000330188 SLC35C2Q9NQQ7 365 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 EHD3Q9NZN3 535 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 P2RX2Q9UBL9 471 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SLC17A4Q9Y2C5 497 aa13.79□□□□□ -0.2
TPM3-206ENST00000330188 SNRNP200O75643 2136 aaKnown RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 A0A1W2PQU0 124 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 HAT1O14929 419 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 PRICKLE3O43900 615 aaPredicted RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 GADD45AP24522 165 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 GDI1P31150 447 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 CNR2P34972 360 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 TIE1P35590 1138 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 SEC13P55735 322 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 SGCGQ13326 291 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 KRT33BQ14525 404 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 RGS21Q2M5E4 152 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 LEXMQ3ZCV2 418 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 TMEM35AQ53FP2 167 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 KIAA1211LQ6NV74 962 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 LACC1Q8IV20 430 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 B3GNT7Q8NFL0 401 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 VANGL1Q8TAA9 524 aaPredicted RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 ZHX1-C8orf76Q96EF9 292 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 MYADMQ96S97 322 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 TREX2Q9BQ50 279 aaPredicted RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 MACROD1Q9BQ69 325 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 RMI1Q9H9A7 625 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 FBXL12Q9NXK8 326 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 REV1Q9UBZ9 1251 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 SEC14L3Q9UDX4 400 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
TPM3-206ENST00000330188 GPC6Q9Y625 555 aaPredicted RBP13.78□□□□□ -0.2
TPM3-206ENST00000330188 ATG2BQ96BY7 2078 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms