RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 OR9A4Q8NGU2 314 aa17■□□□□ 0.31
SYNE4-201ENST00000324444 POP5Q969H6 163 aaKnown RBP17■□□□□ 0.31
SYNE4-201ENST00000324444 TMEM125Q96AQ2 219 aa17■□□□□ 0.31
SYNE4-201ENST00000324444 EXOSC8Q96B26 276 aaKnown RBP17■□□□□ 0.31
SYNE4-201ENST00000324444 C10orf90Q96M02 699 aa17■□□□□ 0.31
SYNE4-201ENST00000324444 DCBLD2Q96PD2 775 aa17■□□□□ 0.31
SYNE4-201ENST00000324444 TRIM15Q9C019 465 aa17■□□□□ 0.31
SYNE4-201ENST00000324444 STRADBQ9C0K7 418 aa17■□□□□ 0.31
SYNE4-201ENST00000324444 SLC7A8Q9UHI5 535 aa17■□□□□ 0.31
SYNE4-201ENST00000324444 TRBV5-3A0A0A0MS03 114 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 A0A0A6YYC8 382 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-201ENST00000324444 H3BMH7 237 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 I3L1I5 382 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-201ENST00000324444 DSCR3O14972 297 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 CSO75390 466 aaKnown RBP16.99■□□□□ 0.31
SYNE4-201ENST00000324444 UQCRC2P22695 453 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 CCKBRP32239 447 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 PDX1P52945 283 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 TXNL4AP83876 142 aaKnown RBP16.99■□□□□ 0.31
SYNE4-201ENST00000324444 CEBPEQ15744 281 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 C1orf146Q5VVC0 180 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 PDSS2Q86YH6 399 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 OR1L3Q8NH93 324 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 JADE3Q92613 823 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 ASB9Q96DX5 294 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 MMABQ96EY8 250 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-201ENST00000324444 DPH2Q9BQC3 489 aaPredicted RBP16.99■□□□□ 0.31
SYNE4-201ENST00000324444 INPP5KQ9BT40 448 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 VAPAQ9P0L0 249 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 CD300AQ9UGN4 299 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 CES1P1Q9UKY3 287 aa16.99■□□□□ 0.31
SYNE4-201ENST00000324444 MRPS2Q9Y399 296 aaKnown RBP16.99■□□□□ 0.31
SYNE4-201ENST00000324444 A0A1B0GX78 115 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 MYO1GB0I1T2 1018 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 SGK494L7N484 410 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 CLIC1O00299 241 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 CHST10O43529 356 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 FOXS1O43638 330 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 BRINP1O60477 761 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 RDH16O75452 317 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 ERAL1O75616 437 aaKnown RBP16.98■□□□□ 0.31
SYNE4-201ENST00000324444 C6orf47O95873 294 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 IFI6P09912 130 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 ANXA11P50995 505 aaKnown RBP16.98■□□□□ 0.31
SYNE4-201ENST00000324444 PLIN5Q00G26 463 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 VAC14Q08AM6 782 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 TRIM25Q14258 630 aaKnown RBP16.98■□□□□ 0.31
SYNE4-201ENST00000324444 C18orf63Q68DL7 685 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 MED25Q71SY5 747 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 HPS6Q86YV9 775 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 CLECL1Q8IZS7 167 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 PSMA8Q8TAA3 256 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 NUDT8Q8WV74 236 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 MIEF2Q96C03 454 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 KCTD14Q9BQ13 255 aaPredicted RBP16.98■□□□□ 0.31
SYNE4-201ENST00000324444 SLC39A3Q9BRY0 314 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 RASSF4Q9H2L5 321 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 ALG2Q9H553 416 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 SLAMF8Q9P0V8 285 aa16.98■□□□□ 0.31
SYNE4-201ENST00000324444 A0A087WV48 116 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 NME4O00746 187 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 TLX3O43711 291 aaPredicted RBP16.97■□□□□ 0.31
SYNE4-201ENST00000324444 B3GALT4O96024 378 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 HOXB9P17482 250 aaPredicted RBP16.97■□□□□ 0.31
SYNE4-201ENST00000324444 ALAS2P22557 587 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 HTR1EP28566 365 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 PTPN6P29350 595 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 GPC1P35052 558 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 NCBP2P52298 156 aaKnown RBP eCLIP16.97■□□□□ 0.31
SYNE4-201ENST00000324444 HBA1P69905 142 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 ELF3P78545 371 aaPredicted RBP16.97■□□□□ 0.31
SYNE4-201ENST00000324444 LIPEQ05469 1076 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 ABHD18Q0P651 414 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 CEACAM7Q14002 265 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 TMEM64Q6YI46 380 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 TTLL10Q6ZVT0 673 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 PPP1R3BQ86XI6 285 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 LRRC25Q8N386 305 aaPredicted RBP16.97■□□□□ 0.31
SYNE4-201ENST00000324444 CIDECQ96AQ7 238 aaPredicted RBP16.97■□□□□ 0.31
SYNE4-201ENST00000324444 CLPTM1LQ96KA5 538 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 OR1F2PQ96R84 312 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 OR6C1Q96RD1 312 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 CMKLR1Q99788 373 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 CPPED1Q9BRF8 314 aaPredicted RBP16.97■□□□□ 0.31
SYNE4-201ENST00000324444 PELOQ9BRX2 385 aaKnown RBP16.97■□□□□ 0.31
SYNE4-201ENST00000324444 TPT1P8Q9HAU6 139 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 C3orf14Q9HBI5 128 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 CMTM6Q9NX76 183 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 NDOR1Q9UHB4 597 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 POMPQ9Y244 141 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 PCDHB3Q9Y5E6 796 aa16.97■□□□□ 0.31
SYNE4-201ENST00000324444 ZNF860A6NHJ4 632 aa16.96■□□□□ 0.31
SYNE4-201ENST00000324444 CYR61O00622 381 aa16.96■□□□□ 0.31
SYNE4-201ENST00000324444 PGRMC2O15173 223 aa16.96■□□□□ 0.31
SYNE4-201ENST00000324444 ZNF749O43361 778 aa16.96■□□□□ 0.31
SYNE4-201ENST00000324444 PDE5AO76074 875 aa16.96■□□□□ 0.31
SYNE4-201ENST00000324444 GPR75O95800 540 aa16.96■□□□□ 0.31
SYNE4-201ENST00000324444 ABCB1P08183 1280 aaPredicted RBP16.96■□□□□ 0.31
SYNE4-201ENST00000324444 FGF5P12034 268 aa16.96■□□□□ 0.31
SYNE4-201ENST00000324444 CHI3L1P36222 383 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms