RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PCBP3P57721 371 aaKnown RBP11.22□□□□□ -0.61
TRIM40-205ENST00000307859 CDK6Q00534 326 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 TNFRSF17Q02223 184 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 CSTF1Q05048 431 aaKnown RBP11.22□□□□□ -0.61
TRIM40-205ENST00000307859 BIRC2Q13490 618 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 DAG1Q14118 895 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 CYBRD1Q53TN4 286 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 KLHL35Q6PF15 583 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 OGFOD3Q6PK18 319 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 TBPL2Q6SJ96 375 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 ABHD13Q7L211 337 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 PIWIL3Q7Z3Z3 882 aaKnown RBP11.22□□□□□ -0.61
TRIM40-205ENST00000307859 ZNF438Q7Z4V0 828 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 ZNF655Q8N720 491 aaPredicted RBP11.22□□□□□ -0.61
TRIM40-205ENST00000307859 NFKBIDQ8NI38 313 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 SUN3Q8TAQ9 357 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 ZCCHC10Q8TBK6 192 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 SFXN5Q8TD22 340 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 TFAP2CQ92754 450 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 HSH2DQ96JZ2 352 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.22□□□□□ -0.61
TRIM40-205ENST00000307859 ANKRD60Q9BZ19 345 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 A4GALTQ9NPC4 353 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 ADPRHL2Q9NX46 363 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 UBAP1Q9NZ09 502 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 KCMF1Q9P0J7 381 aa11.22□□□□□ -0.61
TRIM40-205ENST00000307859 ARID1BQ8NFD5 2236 aaPredicted RBP11.22□□□□□ -0.61
TRIM40-205ENST00000307859 GLOD5A6NK44 160 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 EIF4E1BA6NMX2 242 aaKnown RBP11.21□□□□□ -0.61
TRIM40-205ENST00000307859 WASHC1A8K0Z3 465 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 BCAT2O15382 392 aaPredicted RBP11.21□□□□□ -0.61
TRIM40-205ENST00000307859 SUV39H1O43463 412 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 DPM1O60762 260 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 PIAS2O75928 621 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 HPRP00739 348 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ST6GAL1P15907 406 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ALOX12P18054 663 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ZNF10P21506 573 aaPredicted RBP11.21□□□□□ -0.61
TRIM40-205ENST00000307859 CAPZBP47756 277 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 CCT3P49368 545 aaKnown RBP11.21□□□□□ -0.61
TRIM40-205ENST00000307859 CSNK1EP49674 416 aaKnown RBP11.21□□□□□ -0.61
TRIM40-205ENST00000307859 NCBP2P52298 156 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ARSFP54793 590 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 KCNJ10P78508 379 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 VLDLRP98155 873 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 DUSP2Q05923 314 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 MYBPC3Q14896 1274 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 IQCCQ4KMZ1 466 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 CRB2Q5IJ48 1285 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 WDR45BQ5MNZ6 344 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 TMEM154Q6P9G4 183 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 CEACAM20Q6UY09 585 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 C6orf120Q7Z4R8 191 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 VTCN1Q7Z7D3 282 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 HORMAD2Q8N7B1 307 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 C19orf47Q8N9M1 422 aaKnown RBP11.21□□□□□ -0.61
TRIM40-205ENST00000307859 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 TAMM41Q96BW9 452 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 C10orf90Q96M02 699 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 CNBD2Q96M20 576 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ZNF681Q96N22 645 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 TRAPPC9Q96Q05 1148 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 BBS4Q96RK4 519 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 DOHHQ9BU89 302 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ADI1Q9BV57 179 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 LYRM4Q9HD34 91 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 SEMA3GQ9NS98 782 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 SMPD3Q9NY59 655 aaPredicted RBP11.21□□□□□ -0.61
TRIM40-205ENST00000307859 USE1Q9NZ43 259 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 SCOCQ9UIL1 159 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 PADI4Q9UM07 663 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ENTPD4Q9Y227 616 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ANGPT4Q9Y264 503 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 ADAMTS20P59510 1910 aa11.21□□□□□ -0.61
TRIM40-205ENST00000307859 SPTBP11277 2137 aa11.21□□□□□ -0.62
TRIM40-205ENST00000307859 G3V2T6 193 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 B3GALT2O43825 422 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ERAL1O75616 437 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ALPLP05186 524 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 FABP3P05413 133 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 CSNK2A2P19784 350 aaPredicted RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 AQP1P29972 269 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 DCTP40126 519 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 BUD31P41223 144 aaPredicted RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ALDH3A2P51648 485 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 AFF3P51826 1226 aaKnown RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 LIM2P55344 173 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SELENOWP63302 87 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 MERTKQ12866 999 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SPIDRQ14159 915 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 SPDYE7PQ495Y7 208 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 DEFB134Q4QY38 66 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 C14orf28Q4W4Y0 310 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 LAIR1Q6GTX8 287 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ZDHHC13Q8IUH4 622 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 ARHGEF39Q8N4T4 335 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 CSNK1A1LQ8N752 337 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 KDF1Q8NAX2 398 aaPredicted RBP11.2□□□□□ -0.62
TRIM40-205ENST00000307859 OR5K1Q8NHB7 308 aa11.2□□□□□ -0.62
TRIM40-205ENST00000307859 MAGEE2Q8TD90 523 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms