RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 OR1A2Q9Y585 309 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 AGAP5A6NIR3 686 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 XKRYO14609 159 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 PIM1P11309 404 aaPredicted RBP12.86□□□□□ -0.35
HPS3-201ENST00000296051 CNR2P34972 360 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 NKX3-2P78367 333 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 SLC3A1Q07837 685 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 SEMA3AQ14563 771 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 SLC35F1Q5T1Q4 408 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 AGTRAPQ6RW13 159 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 TMEM207Q6UWW9 146 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 NUDT13Q86X67 352 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 ZNF761Q86XN6 746 aaPredicted RBP12.86□□□□□ -0.35
HPS3-201ENST00000296051 TMC8Q8IU68 726 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 Q8N402 240 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 MOSPD2Q8NHP6 518 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 ZNF583Q96ND8 569 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 TSSK6Q9BXA6 273 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 ACOT13Q9NPJ3 140 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 MAN2B2Q9Y2E5 1009 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 DLGAP4Q9Y2H0 992 aa12.86□□□□□ -0.35
HPS3-201ENST00000296051 ICE1Q9Y2F5 2266 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 A6NCN8 305 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 GLOD5A6NK44 160 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 H7BY64 318 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 ADAM23O75077 832 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 CDC123O75794 336 aaPredicted RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 MAOBP27338 520 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 MAD2L1BPQ15013 274 aaPredicted RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 METTL4Q8N3J2 472 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 OR2T11Q8NH01 316 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 HCAR2Q8TDS4 363 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 ZBED6CLQ96FA7 236 aaPredicted RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 PRAP1Q96NZ9 151 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 GPR78Q96P69 363 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 GINS4Q9BRT9 223 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 SLC46A2Q9BY10 475 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 SLC17A9Q9BYT1 436 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 POPDC3Q9HBV1 291 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 DCAF13Q9NV06 445 aaKnown RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 COL2A1P02458 1487 aaPredicted RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 DLGAP1O14490 977 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 IL7P13232 177 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 CSNK2A2P19784 350 aaPredicted RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 MPIP34949 423 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 CLCN7P51798 805 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 MAZP56270 477 aaKnown RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 AP1S2P56377 157 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 HSF2Q03933 536 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 GINS1Q14691 196 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 ZMYND11Q15326 602 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 ABHD13Q7L211 337 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 CD200R1Q8TD46 325 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 NEK7Q8TDX7 302 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 MMABQ96EY8 250 aaPredicted RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 C1orf74Q96LT6 269 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 A0A1B0GVC2 190 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 A6NIN4 97 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 WASH3PC4AMC7 463 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 SLC6A4P31645 630 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 NCBP2P52298 156 aaKnown RBP eCLIP12.85□□□□□ -0.357e-8■■■■■ 26.9
HPS3-201ENST00000296051 PUS10Q3MIT2 529 aaKnown RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 IKBIPQ70UQ0 350 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 SCD5Q86SK9 330 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 NXPE1Q8N323 547 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 OXR1Q8N573 874 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 PARP16Q8N5Y8 322 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 TTLQ8NG68 377 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 TNFAIP8L1Q8WVP5 186 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 PCNPQ8WW12 178 aaKnown RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 GTF2H4Q92759 462 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 GLYATL1Q969I3 302 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 TMEM80Q96HE8 168 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 LRIG1Q96JA1 1093 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 MAELQ96JY0 434 aaKnown RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 DOHHQ9BU89 302 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 BAIAP2Q9UQB8 552 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 ZDBF2Q9HCK1 2354 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 SBK3P0C264 359 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 DRD1P21728 446 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 ARNTP27540 789 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 ID2Q02363 134 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 RPA4Q13156 261 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 MEX3DQ86XN8 651 aaKnown RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 CMTM7Q96FZ5 175 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 ZDHHC12Q96GR4 267 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 LDAHQ9H6V9 325 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 DIABLOQ9NR28 239 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 FAM120CQ9NX05 1096 aaKnown RBP12.85□□□□□ -0.35
HPS3-201ENST00000296051 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
HPS3-201ENST00000296051 CLCA1A8K7I4 914 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 PTTG1O95997 202 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 RPS17P08708 135 aaKnown RBP12.84□□□□□ -0.35
HPS3-201ENST00000296051 KLHL22Q53GT1 634 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 TMIGD1Q6UXZ0 262 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 Q6ZSR9 355 aa12.84□□□□□ -0.35
HPS3-201ENST00000296051 DCUN1D3Q8IWE4 304 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms