RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 EPS8L2Q9H6S3 715 aa15□□□□□ -0.01
NCKIPSD-201ENST00000294129 HMG20AQ9NP66 347 aa15□□□□□ -0.01
NCKIPSD-201ENST00000294129 INIPQ9NRY2 104 aa15□□□□□ -0.01
NCKIPSD-201ENST00000294129 FBXW2Q9UKT8 454 aa15□□□□□ -0.01
NCKIPSD-201ENST00000294129 ZFR2Q9UPR6 939 aaKnown RBP15□□□□□ -0.01
NCKIPSD-201ENST00000294129 ALPK3Q96L96 1907 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 IGKV1-8A0A0C4DH67 115 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 C5orf67F2Z3F1 127 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 M0R3H8 397 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 CD72P21854 359 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 RAB8AP61006 207 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 SGCGQ13326 291 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 CCDC80Q76M96 950 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 LACC1Q8IV20 430 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 TMEM145Q8NBT3 493 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 MYDGFQ969H8 173 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 NEURL3Q96EH8 262 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 TRMT61BQ9BVS5 477 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 DCSTAMPQ9H295 470 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 SEMA3GQ9NS98 782 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 SIRT3Q9NTG7 399 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 ZCCHC3Q9NUD5 404 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 RFXAPO00287 272 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 HMGN4O00479 90 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 ERI3O43414 337 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 NR2F1P10589 423 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 RHCEP18577 417 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 CHMP24386 653 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 ACVR2AP27037 513 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 NCBP2P52298 156 aaKnown RBP eCLIP14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 REEP5Q00765 189 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 PIN1Q13526 163 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 ZNF846Q147U1 533 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 SEC23BQ15437 767 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 MED22Q15528 200 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 TRIM16LQ309B1 348 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 SAXO2Q658L1 398 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 KIAA1211LQ6NV74 962 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 DGLUCYQ7Z3D6 616 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 B3GNT7Q8NFL0 401 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 OR4D11Q8NGI4 311 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 PHOSPHO2Q8TCD6 241 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 ZBED6CLQ96FA7 236 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 PDXPQ96GD0 296 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 C6orf62Q9GZU0 229 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 RHBGQ9H310 441 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 SERHL2Q9H4I8 314 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 SFXN1Q9H9B4 322 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 PELI2Q9HAT8 420 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 EQTNQ9NQ60 294 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 NECTIN3Q9NQS3 549 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 POLE4Q9NR33 117 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 FBXL12Q9NXK8 326 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 ERGIC3Q9Y282 383 aa14.99□□□□□ -0.01
NCKIPSD-201ENST00000294129 M0R082 166 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 SEMA7AO75326 666 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 SERPINB7O75635 380 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 CDK1P06493 297 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 BMP4P12644 408 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 ZNF793Q6ZN11 406 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 BCDIN3DQ7Z5W3 292 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 DYNC2LI1Q8TCX1 351 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 ZNF675Q8TD23 568 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 CAMK1GQ96NX5 476 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 BBS4Q96RK4 519 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 CHCHD6Q9BRQ6 235 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 QRSL1Q9H0R6 528 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 OR51I1Q9H343 314 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 TMCC3Q9ULS5 477 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 A0A1W2PQU0 124 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 DPM1O60762 260 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 GRK5P34947 590 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 SERPINB10P48595 397 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 CDC42P60953 191 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 CD300CQ08708 224 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 GPR19Q15760 415 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 OR4C11Q6IEV9 310 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 CHPT1Q8WUD6 406 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 FCRL4Q96PJ5 515 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 TREX2Q9BQ50 279 aaPredicted RBP14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 MKRN2Q9H000 416 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 OR51E2Q9H255 320 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 WASH6PQ9NQA3 447 aa14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 PHPT1Q9NRX4 125 aaPredicted RBP14.98□□□□□ -0.01
NCKIPSD-201ENST00000294129 SULT1C4O75897 302 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 SEMA3DO95025 777 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 MFN2O95140 757 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 LSM11P83369 360 aaKnown RBP eCLIP14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 KCNC4Q03721 635 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 DNASE1L3Q13609 305 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 LASP1Q14847 261 aaKnown RBP14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 ARHGAP19Q14CB8 494 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 COLEC12Q5KU26 742 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 CCDC116Q8IYX3 515 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 DEPDC4Q8N2C3 294 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 RAB42Q8N4Z0 105 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 OR2A1Q8NGT9 310 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 MCFD2Q8NI22 146 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 SLC38A4Q969I6 547 aa14.97□□□□□ -0.01
NCKIPSD-201ENST00000294129 NEURL2Q9BR09 285 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms