RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 TSSK3Q96PN8 268 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 ADAM2Q99965 735 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 MED18Q9BUE0 208 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 PRR14Q9BWN1 585 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 RBCK1Q9BYM8 510 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 SLC25A19Q9HC21 320 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 ELOVL2Q9NXB9 296 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 IL17CQ9P0M4 197 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 FAM8A1Q9UBU6 413 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 TSR3Q9UJK0 312 aaKnown RBP12.51□□□□□ -0.41
NUP54-201ENST00000264883 PPT2Q9UMR5 302 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 DLGAP4Q9Y2H0 992 aa12.51□□□□□ -0.41
NUP54-201ENST00000264883 A0A0D9SEW6 157 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 PAHP00439 452 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 F11P03951 625 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 HMBSP08397 361 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 CHRM5P08912 532 aaPredicted RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 GPX2P18283 190 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 PTBP1P26599 531 aaKnown RBP eCLIP12.5□□□□□ -0.415e-7■■■■□ 20.9
NUP54-201ENST00000264883 CNR2P34972 360 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 SLC11A2P49281 568 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 STK19P49842 368 aaPredicted RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 ATP12AP54707 1039 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 HSD17B12Q53GQ0 312 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 MEDAGQ5VYS4 303 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 FAM92BQ6ZTR7 304 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 CHST9Q7L1S5 443 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 OVCH2Q7RTZ1 564 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 GPR65Q8IYL9 337 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 ADGRF3Q8IZF5 1079 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 OR52P1PQ8NH57 321 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 PIH1D2Q8WWB5 315 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 GTPBP3Q969Y2 492 aaKnown RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 PANX1Q96RD7 426 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 MAPKAP1Q9BPZ7 522 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 DOHHQ9BU89 302 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 TAS2R7Q9NYW3 318 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 NDUFAF4Q9P032 175 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 SLC22A23A1A5C7 686 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 KRBOX1C9JBD0 128 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 LINC01387J3KSC0 135 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 FPGTO14772 594 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 TLR5O60602 858 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 ZNF254O75437 659 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 LRATO95237 230 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 TBX18O95935 607 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 AQP1P29972 269 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 SLC6A1P30531 599 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 EVX1P49640 407 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 RPL6Q02878 288 aaKnown RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 MTAPQ13126 283 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 BOP1Q14137 746 aaKnown RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 GPR176Q14439 515 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 ZNF169Q14929 603 aaPredicted RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 NCF4Q15080 339 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 DGKKQ5KSL6 1271 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 SDHAF4Q5VUM1 108 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 ZNF621Q6ZSS3 439 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 KIAA0907Q7Z7F0 614 aaPredicted RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 OR8D4Q8NGM9 314 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 FANK1Q8TC84 345 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 CSGALNACT1Q8TDX6 532 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 MTFMTQ96DP5 389 aaKnown RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 IL4I1Q96RQ9 567 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 PELOQ9BRX2 385 aaKnown RBP12.5□□□□□ -0.41
NUP54-201ENST00000264883 SPON2Q9BUD6 331 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 CIPCQ9C0C6 399 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 HDHD2Q9H0R4 259 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 OR51B5Q9H339 312 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 GHITMQ9H3K2 345 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 CDCP1Q9H5V8 836 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 HPF1Q9NWY4 346 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 KLHL42Q9P2K6 505 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 CORO2BQ9UQ03 480 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 LIPT1Q9Y234 373 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 RNF215Q9Y6U7 377 aa12.5□□□□□ -0.41
NUP54-201ENST00000264883 C7orf66A4D0T2 115 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 HNRNPCL2B2RXH8 293 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 LOC730098B7Z3J9 87 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 M0R233 179 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 SYN3O14994 580 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 STK16O75716 305 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 LDOC1O95751 146 aaPredicted RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 GUCA1CO95843 209 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 HMGN1P05114 100 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 CBSLP0DN79 551 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 FOSL1P15407 271 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 CTPS1P17812 591 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 CXCL3P19876 107 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 DNASE1P24855 282 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 CBSP35520 551 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 GPR15P49685 360 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 CRYBA2P53672 197 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 SRSF11Q05519 484 aaKnown RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 CD276Q5ZPR3 534 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 RTN4RL1Q86UN2 441 aaPredicted RBP12.49□□□□□ -0.41
NUP54-201ENST00000264883 ZBTB2Q8N680 514 aa12.49□□□□□ -0.41
NUP54-201ENST00000264883 FAM46DQ8NEK8 389 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms