RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 CHMP24386 653 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 PRMT2P55345 433 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 MSRB3Q8IXL7 192 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SLC34A3Q8N130 599 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 AUTS2Q8WXX7 1259 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 PYURFQ96I23 114 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 HSH2DQ96JZ2 352 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 CNPPD1Q9BV87 410 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 SLC22A11Q9NSA0 550 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 GPR83Q9NYM4 423 aa13.54□□□□□ -0.24
SCARF1-201ENST00000263071 TMEM88BA6NKF7 163 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 SLC28A1O00337 649 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 HRO43593 1189 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 TPST2O60704 377 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 CCNDBP1O95273 360 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 HOXD8P13378 290 aaPredicted RBP13.53□□□□□ -0.24
SCARF1-201ENST00000263071 HOXC13P31276 330 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 DAPP51397 102 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 NUBP1P53384 320 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 IER5LQ5T953 404 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 ATRAIDQ6UW56 229 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 OR4K1Q8NGD4 311 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 OR8D4Q8NGM9 314 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 NSMAFQ92636 917 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 RBP7Q96R05 134 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 IL4I1Q96RQ9 567 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 PFDN5Q99471 154 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 C3orf14Q9HBI5 128 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 CTPS2Q9NRF8 586 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 LYARQ9NX58 379 aaKnown RBP13.53□□□□□ -0.24
SCARF1-201ENST00000263071 NUMA1Q14980 2115 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 VCANP13611 3396 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 FAM74A7A6NL05 159 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 CLIC1O00299 241 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 PCDHGA12O60330 932 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 HEXBP07686 556 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 CDH12P55289 794 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
SCARF1-201ENST00000263071 FCN2Q15485 313 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 FAM74A3Q4VXF1 159 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 SBSNQ6UWP8 590 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 UBE2R2Q712K3 238 aaPredicted RBP13.53□□□□□ -0.24
SCARF1-201ENST00000263071 RAB11FIP2Q7L804 512 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 TMCO2Q7Z6W1 182 aaPredicted RBP13.53□□□□□ -0.24
SCARF1-201ENST00000263071 STPG2Q8N412 459 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 C2CD4CQ8TF44 421 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 EID2BQ96D98 161 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 COPS8Q99627 209 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 CRB3Q9BUF7 120 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 BRINP2Q9C0B6 783 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 RAD18Q9NS91 495 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 ASH2LQ9UBL3 628 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 SPASTQ9UBP0 616 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 ATXN7L1Q9ULK2 861 aaPredicted RBP13.53□□□□□ -0.24
SCARF1-201ENST00000263071 SBF1O95248 1867 aa13.53□□□□□ -0.24
SCARF1-201ENST00000263071 M0R082 166 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 MANBAO00462 879 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 TAPBPO15533 448 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 STSP08842 583 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 YBEYP58557 167 aaPredicted RBP13.52□□□□□ -0.24
SCARF1-201ENST00000263071 CXCR4P61073 352 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 ZNF79Q15937 498 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 CLLU1OSQ5K130 101 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 MFSD14CQ5VZR4 134 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 OR2T5Q6IEZ7 315 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 C12orf45Q8N5I9 185 aaPredicted RBP13.52□□□□□ -0.24
SCARF1-201ENST00000263071 OR2T29Q8NH02 315 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 ZNF675Q8TD23 568 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 SFT2D1Q8WV19 159 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 ADAMTS14Q8WXS8 1223 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 TREX2Q9BQ50 279 aaPredicted RBP13.52□□□□□ -0.24
SCARF1-201ENST00000263071 ACPTQ9BZG2 426 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 THUMPD1Q9NXG2 353 aaKnown RBP13.52□□□□□ -0.24
SCARF1-201ENST00000263071 BABAM2Q9NXR7 383 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 SEC14L4Q9UDX3 406 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 FBXL2Q9UKC9 423 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 ACSL6Q9UKU0 697 aa13.52□□□□□ -0.24
SCARF1-201ENST00000263071 POM121CA8CG34 1229 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 CFDP00746 253 aaPredicted RBP13.52□□□□□ -0.25
SCARF1-201ENST00000263071 CSF3P09919 207 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 KIR3DL1P43629 444 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 PSPHP78330 225 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 TRAM2Q15035 370 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 MICAQ29983 383 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 AFMIDQ63HM1 303 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 SSX9Q7RTT3 188 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 WDR77Q9BQA1 342 aaPredicted RBP13.52□□□□□ -0.25
SCARF1-201ENST00000263071 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 NCKAP1Q9Y2A7 1128 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 POP7O75817 140 aaKnown RBP13.52□□□□□ -0.25
SCARF1-201ENST00000263071 RASGRP1O95267 797 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 PTNP21246 168 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 FEN1P39748 380 aaKnown RBP13.52□□□□□ -0.25
SCARF1-201ENST00000263071 PTGER3P43115 390 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 ALDH9A1P49189 494 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 STK19P49842 368 aaPredicted RBP13.52□□□□□ -0.25
SCARF1-201ENST00000263071 IRF8Q02556 426 aa13.52□□□□□ -0.25
SCARF1-201ENST00000263071 FGL1Q08830 312 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms