RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 EEF1B2P24534 225 aaKnown RBP12.87□□□□□ -0.35
VMP1-201ENST00000262291 AKT2P31751 481 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 FEN1P39748 380 aaKnown RBP12.87□□□□□ -0.35
VMP1-201ENST00000262291 MAGEA2P43356 314 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 DAPP51397 102 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 PPP1CAP62136 330 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 GPR18Q14330 331 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 FAM209AQ5JX71 171 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 IKBIPQ70UQ0 350 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 SIX5Q8N196 739 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 RBM4BQ9BQ04 359 aaKnown RBP12.87□□□□□ -0.35
VMP1-201ENST00000262291 RBM4Q9BWF3 364 aaKnown RBP12.87□□□□□ -0.35
VMP1-201ENST00000262291 POLE4Q9NR33 117 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 ADPRHL2Q9NX46 363 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.87□□□□□ -0.35
VMP1-201ENST00000262291 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
VMP1-201ENST00000262291 COL4A2P08572 1712 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 A0A0A6YYD5 115 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 A0A1W2PR48 441 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 MBTPS2O43462 519 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 CLEC3AO75596 197 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 SEMG1P04279 462 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 PCSK2P16519 638 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 MATN1P21941 496 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 CMPK1P30085 196 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 RRM2P31350 389 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 GPC1P35052 558 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 RPL3P39023 403 aaKnown RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 HNRNPFP52597 415 aaKnown RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 LRRC74AQ0VAA2 488 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 VEZF1Q14119 521 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 CTU2Q2VPK5 515 aaKnown RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 KCTD8Q6ZWB6 473 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 TRIM69Q86WT6 500 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 TRIM48Q8IWZ4 208 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 ACOT4Q8N9L9 421 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 C7orf34Q96L11 122 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 ALPK1Q96QP1 1244 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 SIRT3Q9NTG7 399 aaPredicted RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 CORO2BQ9UQ03 480 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 ZW10O43264 779 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 IGFBP5P24593 272 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 NR4A2P43354 598 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 DGKEP52429 567 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 BTN3A2P78410 334 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 GANABQ14697 944 aaKnown RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 TRIM40Q6P9F5 258 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 Q6ZPB1 254 aaPredicted RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 PIWIL3Q7Z3Z3 882 aaKnown RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 C6orf120Q7Z4R8 191 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 CCDC116Q8IYX3 515 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 CLIP4Q8N3C7 705 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 ZNF555Q8NEP9 628 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 BPIFB6Q8NFQ5 453 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 UBE2FQ969M7 185 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 DOHHQ9BU89 302 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 RAB11FIP5Q9BXF6 653 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 DDX31Q9H8H2 851 aaKnown RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 CD320Q9NPF0 282 aa12.86□□□□□ -0.35
VMP1-201ENST00000262291 THUMPD1Q9NXG2 353 aaKnown RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 IFT80Q9P2H3 777 aaPredicted RBP12.86□□□□□ -0.35
VMP1-201ENST00000262291 COL6A3P12111 3177 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 ZNF860A6NHJ4 632 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 TOR1BO14657 336 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 EIF2S1P05198 315 aaKnown RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 UQCRC2P22695 453 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 MAOBP27338 520 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 DCKP27707 260 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 OPRL1P41146 370 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 NCBP2P52298 156 aaKnown RBP eCLIP12.85□□□□□ -0.354e-8■□□□□ 10.2
VMP1-201ENST00000262291 DSTNP60981 165 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 OLR1P78380 273 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 OXA1LQ15070 435 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 GPR19Q15760 415 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 IQCCQ4KMZ1 466 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 SHQ1Q6PI26 577 aaKnown RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 WDR53Q7Z5U6 358 aaPredicted RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 ATG16L2Q8NAA4 619 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 CNIH3Q8TBE1 160 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 TRUB1Q8WWH5 349 aaKnown RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 MTERF3Q96E29 417 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 GLIPR2Q9H4G4 154 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 SERHL2Q9H4I8 314 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 PRDM7Q9NQW5 492 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 TMEM74BQ9NUR3 256 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 TRPC4Q9UBN4 977 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 KPNA4O00629 521 aaPredicted RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 CTSVO60911 334 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 GUCY1B2O75343 617 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 APBB3O95704 486 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 BCL10O95999 233 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 ZNF888P0CJ79 500 aaPredicted RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 IL1RNP18510 177 aa12.85□□□□□ -0.35
VMP1-201ENST00000262291 ATP5A1P25705 553 aaKnown RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 EEF1A2Q05639 463 aaKnown RBP12.85□□□□□ -0.35
VMP1-201ENST00000262291 GAS6Q14393 721 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms