RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ACTL7BQ9Y614 415 aa22.67■■□□□ 1.22
SDF2L1-201ENST00000248958 FLNBO75369 2602 aaKnown RBP22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 GLOD5A6NK44 160 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 OR10H2O60403 315 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 MAN1A2O60476 641 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 DDAH2O95865 285 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 CD46P15529 392 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 CHN1P15882 459 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 SERPINB5P36952 375 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 HMGCS1Q01581 520 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 OC90Q02509 493 aaPredicted RBP22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 IMPG1Q17R60 797 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 TNFAIP8L3Q5GJ75 292 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 FAM180AQ6UWF9 173 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 TRIM46Q7Z4K8 759 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 EXOC3L1Q86VI1 746 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 OR5L2Q8NGL0 311 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 TM4SF18Q96CE8 201 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 PGM2Q96G03 612 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 METTL2AQ96IZ6 378 aaKnown RBP22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 TRIM45Q9H8W5 580 aaPredicted RBP22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 RYDENQ9NUL5 291 aaKnown RBP22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 LRFN1Q9P244 771 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 YARS2Q9Y2Z4 477 aaKnown RBP22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 SHANK1Q9Y566 2161 aa22.66■■□□□ 1.22
SDF2L1-201ENST00000248958 PCDH7O60245 1069 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 CREB1P16220 341 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 CYB561P49447 251 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 OR1C1Q15619 314 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 ZNF766Q5HY98 468 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 GALNT18Q6P9A2 607 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 RNF165Q6ZSG1 346 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 TMEM178AQ8NBL3 297 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 MDS2Q8NDY4 140 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 ZNF721Q8TF20 911 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 APIPQ96GX9 242 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 SENP5Q96HI0 755 aaPredicted RBP22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 C5orf34Q96MH7 638 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 STMN4Q9H169 189 aaPredicted RBP22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 CENPHQ9H3R5 247 aa22.65■■□□□ 1.22
SDF2L1-201ENST00000248958 GOLGA6L10A6NI86 522 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 AZIN1O14977 448 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 PGRMC2O15173 223 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 TM9SF1O15321 606 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 RSL1D1O76021 490 aaKnown RBP22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 CHEK2O96017 543 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 FGF4P08620 206 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 DRD2P14416 443 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 TIA1P31483 386 aaKnown RBP eCLIP22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 ETV4P43268 484 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 HLCSP50747 726 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 SPDYAQ5MJ70 313 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 SLC48A1Q6P1K1 146 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 BCORP1Q8N888 145 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 RIT1Q92963 219 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 PPWD1Q96BP3 646 aaKnown RBP22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 C19orf60Q96EN9 201 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 C11orf24Q96F05 449 aaPredicted RBP22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 FBXL20Q96IG2 436 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 MECRQ9BV79 373 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 MYOTQ9UBF9 498 aa22.64■■□□□ 1.21
SDF2L1-201ENST00000248958 TENM4Q6N022 2769 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 GNG14A0A1W2PPG7 69 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 WASHC1A8K0Z3 465 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 SLC28A1O00337 649 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 ITGA10O75578 1167 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 RASAL1O95294 804 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 BPGMP07738 259 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 SERPINB3P29508 390 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 XKP51811 444 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 RNF4P78317 190 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 BEND6Q5SZJ8 279 aaPredicted RBP22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 C6orf163Q5TEZ5 329 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 FAM219BQ5XKK7 198 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 SCIMPQ6UWF3 145 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 GPALPP1Q8IXQ4 340 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 TMEM156Q8N614 296 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 DNAJB8Q8NHS0 232 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 FAM76AQ8TAV0 307 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 NUBPLQ8TB37 319 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 GRHL3Q8TE85 626 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 THAP3Q8WTV1 239 aaPredicted RBP22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 FAR1Q8WVX9 515 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 UCN3Q969E3 161 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 SCMH1Q96GD3 660 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 SIGLEC12Q96PQ1 595 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 SHCBP1LQ9BZQ2 653 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 ANKRD10Q9NXR5 420 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 CES1P1Q9UKY3 287 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 NTNG1Q9Y2I2 539 aa22.63■■□□□ 1.21
SDF2L1-201ENST00000248958 NPIPB8E9PQR5 432 aa22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 RGS14O43566 566 aa22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 PRKNO60260 465 aaPredicted RBP22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 NEURL1O76050 574 aa22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 CRYABP02511 175 aaKnown RBP22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 IGKV3-11P04433 115 aa22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 PORP16435 677 aaPredicted RBP22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 PRPH2P23942 346 aa22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 SSR4P51571 173 aa22.62■■□□□ 1.21
SDF2L1-201ENST00000248958 RAE1P78406 368 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms