RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 WNT3P56703 355 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 SKP1P63208 163 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 DLG1Q12959 904 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 RBBP5Q15291 538 aaKnown RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 PHKG1Q16816 387 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 TECRLQ5HYJ1 363 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 CLEC9AQ6UXN8 241 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 CLNKQ7Z7G1 428 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 CA13Q8N1Q1 262 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 PLD6Q8N2A8 252 aaKnown RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 SPATA6LQ8N4H0 392 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 VMP1Q96GC9 406 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 HIST1H2AHQ96KK5 128 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 HIST1H2AJQ99878 128 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 MRPL57Q9BQC6 102 aaKnown RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 H2AFJQ9BTM1 129 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 SGPP1Q9BX95 441 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 MRPL46Q9H2W6 279 aaKnown RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 ALG9Q9H6U8 611 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 ZDHHC11Q9H8X9 412 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 KCNK9Q9NPC2 374 aa12.78□□□□□ -0.36
DDX39A-201ENST00000242776 YARS2Q9Y2Z4 477 aaKnown RBP12.78□□□□□ -0.36
DDX39A-201ENST00000242776 FBN3Q75N90 2809 aa12.77□□□□□ -0.36
DDX39A-201ENST00000242776 TRBC2A0A5B9 178 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 A6NNC1 897 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 TGFBR3LH3BV60 316 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 CDC7O00311 574 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 TM9SF1O15321 606 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 KERAO60938 352 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 ZFAND5O76080 213 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 GUCA1CO95843 209 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 TAC1P20366 129 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 GMPRP36959 345 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 MAN2A2P49641 1150 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 AP1S2P56377 157 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 BTN3A2P78410 334 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 PWP1Q13610 501 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 KEAP1Q14145 624 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 TSNQ15631 228 aaKnown RBP12.77□□□□□ -0.37
DDX39A-201ENST00000242776 TRILQ7L0X0 811 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 BIVMQ86UB2 503 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 ARMC10Q8N2F6 343 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 VWA5B2Q8N398 1253 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 CCDC63Q8NA47 563 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 FAM47BQ8NA70 645 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 NT5CQ8TCD5 201 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 OR4K3Q96R72 315 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 HAUS8Q9BT25 410 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 PARVBQ9HBI1 364 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 NUDT4Q9NZJ9 180 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 XPR1Q9UBH6 696 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 CBLCQ9ULV8 474 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 TMCO1Q9UM00 188 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 OARD1Q9Y530 152 aa12.77□□□□□ -0.37
DDX39A-201ENST00000242776 SUPT3HB4E1H0 165 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 TYROBPO43914 113 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 SMIM24O75264 130 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 SUPT3HO75486 399 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 CCND1P24385 295 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 TACR1P25103 407 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 HNRNPFP52597 415 aaKnown RBP12.76□□□□□ -0.37
DDX39A-201ENST00000242776 CDKL1Q00532 357 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 SLC13A2Q13183 592 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 DEFB113Q30KQ7 82 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 SLC25A35Q3KQZ1 300 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 WLSQ5T9L3 541 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 SBSNQ6UWP8 590 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 PAMR1Q6UXH9 720 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 GK5Q6ZS86 529 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 FAM47EQ6ZV65 393 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 CHSY3Q70JA7 882 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 ISCA2Q86U28 154 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 GPSM1Q86YR5 675 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 FAM109AQ8N4B1 249 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 TBC1D19Q8N5T2 526 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 ZNF321PQ8N8H1 164 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 TMEM52Q8NDY8 209 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 RDH11Q8TC12 318 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 NEIL2Q969S2 332 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 GPR78Q96P69 363 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 RASL10BQ96S79 203 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 MDFIQ99750 246 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 EGFL8Q99944 293 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 SEMA4BQ9NPR2 832 aaPredicted RBP12.76□□□□□ -0.37
DDX39A-201ENST00000242776 PRTFDC1Q9NRG1 225 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 ARL15Q9NXU5 204 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 TMEM216Q9P0N5 145 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 ZFP69BQ9UJL9 534 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 EDARQ9UNE0 448 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 PLLPQ9Y342 182 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 KIAA1549Q9HCM3 1950 aa12.76□□□□□ -0.37
DDX39A-201ENST00000242776 NINQ8N4C6 2090 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 OR14I1A6ND48 311 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 KIAA1324LA8MWY0 1029 aaPredicted RBP12.75□□□□□ -0.37
DDX39A-201ENST00000242776 RAF1P04049 648 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 IFNA16P05015 189 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 INHBBP09529 407 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 CREB1P16220 341 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 CNR1P21554 472 aa12.75□□□□□ -0.37
DDX39A-201ENST00000242776 BMP5P22003 454 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms