RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 LOC102723532A0A0G2JNH3 316 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 AQP12BA6NM10 295 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 ETV1P50549 477 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 RPL26P61254 145 aaKnown RBP10.68□□□□□ -0.7
MSH6-201ENST00000234420 TLE3Q04726 772 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 PRAMEF14Q5SWL7 426 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 C22orf42Q6IC83 251 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 MON1AQ86VX9 555 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 AQP12AQ8IXF9 295 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 DCUN1D4Q92564 292 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 PYCR2Q96C36 320 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 BCL7BQ9BQE9 202 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 CRB3Q9BUF7 120 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 MFRPQ9BY79 579 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 PDE7BQ9NP56 450 aa10.68□□□□□ -0.7
MSH6-201ENST00000234420 KRBA1A5PL33 1030 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 C2orf72A6NCS6 295 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 GPR25O00155 361 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 STK16O75716 305 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 MAPK3P27361 379 aaPredicted RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 VIPR1P32241 457 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ARHGAP11BQ3KRB8 267 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 STEAP3Q658P3 488 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 PACRGLQ8N7B6 248 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 GCDHQ92947 438 aaPredicted RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 AZIN2Q96A70 460 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 FAM234AQ9H0X4 552 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 HMGN1P05114 100 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ALPPP05187 535 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 PAEPP09466 180 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 BDKRB1P46663 353 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 DUSP3P51452 185 aaPredicted RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 NDUFA6P56556 154 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 RCBTB1Q8NDN9 531 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 LILRB4Q8NHJ6 448 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ZDHHC12Q96GR4 267 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 SLC35G5Q96KT7 338 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 GATA5Q9BWX5 397 aaPredicted RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 PCDHGA2Q9Y5H1 932 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 GGT3PA6NGU5 568 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 TOR1AO14656 332 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 LATO43561 262 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 P04436 131 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 CSF2RAP15509 400 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 CD34P28906 385 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 MPIP34949 423 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 CDC42BPAQ5VT25 1732 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 MBLAC2Q68D91 279 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 CNKSR3Q6P9H4 555 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 WDR53Q7Z5U6 358 aaPredicted RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 SCAMP5Q8TAC9 235 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 NDNFQ8TB73 568 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 CNIH3Q8TBE1 160 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 GPR21Q99679 349 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 PATZ1Q9HBE1 687 aaKnown RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 SMOXQ9NWM0 555 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 RNF186Q9NXI6 227 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ZDHHC3Q9NYG2 299 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 SCN2AQ99250 2005 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 REREQ9P2R6 1566 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 PRSS44E7EML9 344 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ICMTO60725 284 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ECI2O75521 394 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ZIC2O95409 532 aaPredicted RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 CHRNB2P17787 502 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 BMXP51813 675 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ARHGAP11AQ6P4F7 1023 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 CNOT9Q92600 299 aaKnown RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 SLAMF9Q96A28 289 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ESAMQ96AP7 390 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 HRH4Q9H3N8 390 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 HTR1AP08908 422 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 GP1BBP13224 206 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 SSTR2P30874 369 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 SFTPDP35247 375 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 LCP2Q13094 533 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 DACT2Q5SW24 774 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 UGT2A3Q6UWM9 527 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 SKA3Q8IX90 412 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 TXNDC5Q8NBS9 432 aaKnown RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 SLC6A16Q9GZN6 736 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 SOX17Q9H6I2 414 aaPredicted RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 OR6C75A6NL08 312 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ZNF670-ZNF695F2Z2N8 137 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ASGR2P07307 311 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 F7P08709 466 aaPredicted RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 PKMP14618 531 aaKnown RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 CELP19835 753 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 PTH2RP49190 550 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 VEGFCP49767 419 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 C3P1Q6ZMU1 363 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 CELF5Q8N6W0 485 aaKnown RBP10.67□□□□□ -0.7
MSH6-201ENST00000234420 ZNF610Q8N9Z0 462 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 TAAR8Q969N4 342 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 LGALS12Q96DT0 336 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ITPKCQ96DU7 683 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 BTN2A3PQ96KV6 586 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 TXN2Q99757 166 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 ASB7Q9H672 318 aa10.67□□□□□ -0.7
MSH6-201ENST00000234420 FLRT1Q9NZU1 646 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms