RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SOX9P48436 509 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 C1orf94Q6P1W5 598 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 LGALS12Q96DT0 336 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 F2RL3Q96RI0 385 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 OR10A4Q9H209 315 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 RABL2AQ9UBK7 228 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 RABL2BQ9UNT1 228 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 MAB21L2Q9Y586 359 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 DNAJC15Q9Y5T4 150 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 SMIM30A4D0T7 59 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 SLC35F4A4IF30 521 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 KCNJ13O60928 360 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 IL33O95760 270 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ERCC1P07992 297 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 MRPL3P09001 348 aaKnown RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 GKN3PP0CG01 181 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 NDUFV2P19404 249 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 OXTRP30559 389 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ACTA2P62736 377 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ACTG2P63267 376 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ZNF33BQ06732 778 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 C1orf220Q5T0J3 134 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 EMC10Q5UCC4 262 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ACBD7Q8N6N7 88 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 URM1Q9BTM9 101 aaKnown RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 SLC5A7Q9GZV3 580 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 GSKIPQ9P0R6 139 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 EPHA6Q9UF33 1036 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 CNOT11Q9UKZ1 510 aaKnown RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 PADI2Q9Y2J8 665 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 A0A1W2PPL8 197 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ARHGEF15O94989 841 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 JMJD7P0C870 316 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 FRKP42685 505 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 MAGEA8P43361 318 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 PLCXD2Q0VAA5 305 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 MRPL49Q13405 166 aaKnown RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 RNF111Q6ZNA4 994 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 CEACAM19Q7Z692 300 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 TEX26Q8N6G2 289 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 OR5J2Q8NH18 312 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 RPLP0P6Q8NHW5 317 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 SHISA4Q96DD7 197 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ACTR6Q9GZN1 396 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 SLCO3A1Q9UIG8 710 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 MAGED1Q9Y5V3 778 aaPredicted RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 OR6C74A6NCV1 312 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 M0R233 179 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 RNGTTO60942 597 aaKnown RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 RAD51DO75771 328 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 SYNGR4O95473 234 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 PGCP20142 388 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 PYCR1P32322 319 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ZNF181Q2M3W8 571 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 CTC1Q2NKJ3 1217 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 MANEALQ5VSG8 457 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ARHGAP11AQ6P4F7 1023 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ZNF584Q8IVC4 421 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 HS3ST5Q8IZT8 346 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 OR8K3Q8NH51 312 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 STOML3Q8TAV4 291 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ADAMTS18Q8TE60 1221 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 RTP4Q96DX8 246 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 SGTBQ96EQ0 304 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 IRF2BPLQ9H1B7 796 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 WDR6Q9NNW5 1121 aaKnown RBP12.98□□□□□ -0.33
SF3A1-201ENST00000215793 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
SF3A1-201ENST00000215793 C11orf98E9PRG8 122 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 H3BSH0 61 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 GPR32O75388 356 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 CBLP22681 906 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 MLLT10P55197 1068 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 OR4D2P58180 307 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 GABARAPL2P60520 117 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 DHCR24Q15392 516 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 LCN8Q6JVE9 175 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 ALDH16A1Q8IZ83 802 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 CSNK1A1LQ8N752 337 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 HUS1BQ8NHY5 278 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 SMARCD2Q92925 531 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 L3HYPDHQ96EM0 354 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 TEPSINQ96N21 525 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 RBCK1Q9BYM8 510 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 IL21RQ9HBE5 538 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 CLCA1A8K7I4 914 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 NPIPA2E9PIF3 369 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 NPIPA3F8WFD2 350 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 M0R036 132 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 LRRTM2O43300 516 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 CKMT1AP12532 417 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 PORP16435 677 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-201ENST00000215793 SPINT3P49223 89 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 ARSDP51689 593 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 CAPZA1P52907 286 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 HSD11B2P80365 405 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 UGT8Q16880 541 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
SF3A1-201ENST00000215793 MS4A15Q8N5U1 240 aa12.97□□□□□ -0.33
SF3A1-201ENST00000215793 OR52B6Q8NGF0 335 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms