RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TRBC2A0A5B9 178 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 VEGFDO43915 354 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 KIAA0513O60268 411 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 CDK1P06493 297 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 CKMT1AP12532 417 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 E2F2Q14209 437 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 C9orf50Q5SZB4 431 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 HDDC3Q8N4P3 179 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 HORMAD2Q8N7B1 307 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 LINC01555Q8NAE3 123 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 VANGL1Q8TAA9 524 aaPredicted RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 WDR34Q96EX3 536 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 METTL2AQ96IZ6 378 aaKnown RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 BCL7BQ9BQE9 202 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 YIPF4Q9BSR8 244 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 DDX28Q9NUL7 540 aaKnown RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 ZNF226Q9NYT6 803 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 EHD3Q9NZN3 535 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 GON4LQ3T8J9 2241 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 CKAP5Q14008 2032 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 SMIM30A4D0T7 59 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 RFXAPO00287 272 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 TMPRSS11DO60235 418 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 TPST2O60704 377 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 CCNKO75909 580 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 MFN2O95140 757 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 SLC35G4P0C7Q5 338 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 TIE1P35590 1138 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 GGT2P36268 569 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 PBX2P40425 430 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 PRKAG1P54619 331 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 PCDH1Q08174 1060 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 FADDQ13158 208 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 PDE7AQ13946 482 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 PDGFRLQ15198 375 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 LEXMQ3ZCV2 418 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 TMEM52BQ4KMG9 183 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 KHDRBS2Q5VWX1 349 aaKnown RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 SLC46A3Q7Z3Q1 461 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 RBM45Q8IUH3 476 aaKnown RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 B3GNT7Q8NFL0 401 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 ARMC5Q96C12 935 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 LINC00615Q96LM1 132 aaPredicted RBP12.48□□□□□ -0.41
CTNS-201ENST00000046640 C17orf62Q9BQA9 187 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 CNPPD1Q9BV87 410 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 NLNQ9BYT8 704 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 NUAK2Q9H093 628 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 PADI2Q9Y2J8 665 aa12.48□□□□□ -0.41
CTNS-201ENST00000046640 MYO15AQ9UKN7 3530 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 PNMA8CA0A1B0GUJ8 204 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 UBE3AQ05086 875 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 RUNX3Q13761 415 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 DOC2BQ14184 412 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 KRT33BQ14525 404 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 C2orf27AQ580R0 203 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 KLHL17Q6TDP4 642 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 UBE2J2Q8N2K1 259 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 OXR1Q8N573 874 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 OR5K2Q8NHB8 316 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 TM4SF18Q96CE8 201 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 EPYCQ99645 322 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 WFDC6Q9BQY6 131 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 C11orf16Q9NQ32 467 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 STON1Q9Y6Q2 735 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 TFECO14948 347 aaPredicted RBP12.47□□□□□ -0.41
CTNS-201ENST00000046640 MED26O95402 600 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
CTNS-201ENST00000046640 S100A1P23297 94 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 PIK3CBP42338 1070 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 CASP3P42574 277 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 RGS6P49758 472 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 DSTNP60981 165 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 MXD1Q05195 221 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 DMPKQ09013 629 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 FGL2Q14314 439 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 ZNF750Q32MQ0 723 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 ZNF765Q7L2R6 523 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 OR5D16Q8NGK9 328 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 GOT1L1Q8NHS2 421 aaPredicted RBP12.47□□□□□ -0.41
CTNS-201ENST00000046640 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
CTNS-201ENST00000046640 INSM2Q96T92 566 aaPredicted RBP12.47□□□□□ -0.41
CTNS-201ENST00000046640 AIF1LQ9BQI0 150 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 RSPO3Q9BXY4 272 aaPredicted RBP12.47□□□□□ -0.41
CTNS-201ENST00000046640 ZNF717Q9BY31 904 aaPredicted RBP12.47□□□□□ -0.41
CTNS-201ENST00000046640 CTPS2Q9NRF8 586 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 IFT52Q9Y366 437 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 BOLA1Q9Y3E2 137 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 PCDHGB6Q9Y5F9 930 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 SPEGQ15772 3267 aa12.47□□□□□ -0.41
CTNS-201ENST00000046640 TRBV23OR9-2A0A075B6M9 112 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 C5orf58C9J3I9 102 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 LOC110117498-PIK3R3F6TDL0 507 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 ADAMDEC1O15204 470 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 KMOO15229 486 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 B4GALT2O60909 372 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 SOX14O95416 240 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 HNRNPFP52597 415 aaKnown RBP12.46□□□□□ -0.41
CTNS-201ENST00000046640 TUBA1BP68363 451 aa12.46□□□□□ -0.41
CTNS-201ENST00000046640 EIF4HQ15056 248 aaKnown RBP12.46□□□□□ -0.41
CTNS-201ENST00000046640 TAB1Q15750 504 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms