RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ADAP2Q9NPF8 381 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 B3GNT3Q9Y2A9 372 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 FIS1Q9Y3D6 152 aa20.33■□□□□ 0.84
SCN1B-206ENST00000638536 WDR91A4D1P6 747 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 TMEM233B4DJY2 109 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 PRKNO60260 465 aaPredicted RBP20.32■□□□□ 0.84
SCN1B-206ENST00000638536 WDPCPO95876 746 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 NR2F6P10588 404 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 BUD31P41223 144 aaPredicted RBP20.32■□□□□ 0.84
SCN1B-206ENST00000638536 ARL13AQ5H913 290 aaPredicted RBP20.32■□□□□ 0.84
SCN1B-206ENST00000638536 NDUFAF5Q5TEU4 345 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 PAGE2Q7Z2X7 111 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 HPS6Q86YV9 775 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 GBP7Q8N8V2 638 aaPredicted RBP20.32■□□□□ 0.84
SCN1B-206ENST00000638536 NCLNQ969V3 563 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 C11orf24Q96F05 449 aaPredicted RBP20.32■□□□□ 0.84
SCN1B-206ENST00000638536 TUBB1Q9H4B7 451 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 SSU72Q9NP77 194 aaKnown RBP20.32■□□□□ 0.84
SCN1B-206ENST00000638536 STMN3Q9NZ72 180 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 PPIEQ9UNP9 301 aaKnown RBP20.32■□□□□ 0.84
SCN1B-206ENST00000638536 FLNCQ14315 2725 aa20.32■□□□□ 0.84
SCN1B-206ENST00000638536 SERTM1A2A2V5 107 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 BLACEA4D250 179 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 UQCRHP07919 91 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 TLX1P31314 330 aaPredicted RBP20.31■□□□□ 0.84
SCN1B-206ENST00000638536 MAPK12P53778 367 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 ELAVL1Q15717 326 aaKnown RBP20.31■□□□□ 0.84
SCN1B-206ENST00000638536 ACER2Q5QJU3 275 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 BEST3Q8N1M1 668 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 TM9SF4Q92544 642 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 TANKQ92844 425 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 CDCP1Q9H5V8 836 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 CCL27Q9Y4X3 112 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 HRKO00198 91 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 NPHS1O60500 1241 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 CRCPO75575 148 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 DHRS4L1P0CG22 281 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 UROSP10746 265 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 SERPINB4P48594 390 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 SERTAD2Q14140 314 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 TERF2Q15554 542 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 IGFBP7Q16270 282 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 ZNF750Q32MQ0 723 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 THAP3Q8WTV1 239 aaPredicted RBP20.31■□□□□ 0.84
SCN1B-206ENST00000638536 ZNF395Q9H8N7 513 aaPredicted RBP20.31■□□□□ 0.84
SCN1B-206ENST00000638536 KCNK9Q9NPC2 374 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 NMRK1Q9NWW6 199 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 ANKRD10Q9NXR5 420 aa20.31■□□□□ 0.84
SCN1B-206ENST00000638536 BAHCC1Q9P281 2608 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 TRBV11-1A0A0K0K1C0 115 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 TTLL8A6PVC2 850 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 C17orf105B2RV13 164 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 AZIN1O14977 448 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 GPR75O95800 540 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 DDAH2O95865 285 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 STT3AP46977 705 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 AP2B1P63010 937 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 ARG2P78540 354 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 ABHD17BQ5VST6 288 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 FAM180BQ6P0A1 224 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 C16orf47Q6ZP98 133 aaPredicted RBP20.3■□□□□ 0.84
SCN1B-206ENST00000638536 TRIM46Q7Z4K8 759 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 AGR3Q8TD06 166 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 HAS2Q92819 552 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 TRMOQ9BU70 441 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 EBPLQ9BY08 206 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 LIN28AQ9H9Z2 209 aaKnown RBP20.3■□□□□ 0.84
SCN1B-206ENST00000638536 TMBIM4Q9HC24 238 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 SLAMF7Q9NQ25 335 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 HEY2Q9UBP5 337 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 CES1P1Q9UKY3 287 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 ACTL7BQ9Y614 415 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 CLCA3PQ9Y6N3 262 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 EML6Q6ZMW3 1958 aa20.3■□□□□ 0.84
SCN1B-206ENST00000638536 MYZAPP0CAP1 466 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 TNNI3P19429 210 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 ASPHQ12797 758 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 UGT3A2Q3SY77 523 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 SPDYAQ5MJ70 313 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 ZNF468Q5VIY5 522 aaPredicted RBP20.29■□□□□ 0.84
SCN1B-206ENST00000638536 KANK2Q63ZY3 851 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 CROCCP2Q86T23 111 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 NUDCD3Q8IVD9 361 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 OR2T11Q8NH01 316 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 C19orf60Q96EN9 201 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 ZNF354BQ96LW1 612 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 OR8D2Q9GZM6 311 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 ILKAPQ9H0C8 392 aaPredicted RBP20.29■□□□□ 0.84
SCN1B-206ENST00000638536 PCDHA9Q9Y5H5 950 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 DNAJC15Q9Y5T4 150 aa20.29■□□□□ 0.84
SCN1B-206ENST00000638536 TMEM200CA6NKL6 621 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 H3BQF6 201 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 ITM2AO43736 263 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 PCDH7O60245 1069 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 LYPLA1O75608 230 aaPredicted RBP20.28■□□□□ 0.84
SCN1B-206ENST00000638536 TNFSF10P50591 281 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 CLCN2P51788 898 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 ACSM2AQ08AH3 577 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 MEP1AQ16819 746 aa20.28■□□□□ 0.84
SCN1B-206ENST00000638536 ACSM2BQ68CK6 577 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms