RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 FOLR3P41439 243 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 KDELC1Q6UW63 502 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 OR5K1Q8NHB7 308 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 C2orf15Q8WU43 125 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ELF4Q99607 663 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ACTL8Q9H568 366 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 C5AR2Q9P296 337 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 RBPJLQ9UBG7 517 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 H7C417 338 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 MAP2K7O14733 419 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 PNMTP11086 282 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ATF6P18850 670 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 MMP8P22894 467 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 HOXA10P31260 410 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 HERVK_113P63132 956 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF33BQ06732 778 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 UBE2Q1Q7Z7E8 422 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 SCGB3A2Q96PL1 93 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 MND1Q9BWT6 205 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ERVK-6Q9BXR3 956 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 MTMR10Q9NXD2 777 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 THEGLP0DJG4 465 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 C6P13671 934 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 LBX2Q6XYB7 198 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 LRRC55Q6ZSA7 311 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 S100A16Q96FQ6 103 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 MCHR1Q99705 422 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 HSD17B14Q9BPX1 270 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 WWTR1Q9GZV5 400 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ZDHHC2Q9UIJ5 367 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 CD207Q9UJ71 328 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ABCG2Q9UNQ0 655 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 MYO10Q9HD67 2058 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 CA3P07451 260 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 CHMP24386 653 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF852Q6ZMS4 543 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 LINC00471Q8N535 108 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 POC1BQ8TC44 478 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 B4GALT6Q9UBX8 382 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 LILRB3O75022 631 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 MT-ND5P03915 603 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 PTGS2P35354 604 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 RCAN2Q14206 197 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 BRAT1Q6PJG6 821 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 DENND1AQ8TEH3 1009 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 GEMIN6Q8WXD5 167 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 SMPDL3AQ92484 453 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 MS4A12Q9NXJ0 267 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 SETBP1Q9Y6X0 1596 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 G3V3Y1 287 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 BEST1O76090 585 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 DBHP09172 617 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 TMEM225BP0DP42 221 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 G6PDP11413 515 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 GSTM2P28161 218 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 LMAN2Q12907 356 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 NFE2L1Q14494 772 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 PGAM4Q8N0Y7 254 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 H1FXQ92522 213 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 BORCS5Q969J3 196 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 HSH2DQ96JZ2 352 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 SMOXQ9NWM0 555 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF451Q9Y4E5 1061 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 NPIPA5A0A0B4J1W7 369 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 NPIPA7E9PJI5 369 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 NPIPA8P0DM63 369 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 S1PR1P21453 382 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 GABRR1P24046 479 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 ST3GAL3Q11203 375 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 ADAM15Q13444 863 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 TMEM236Q5W0B7 351 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 VGLL2Q8N8G2 317 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 C17orf50Q8WW18 174 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 ACOT12Q8WYK0 555 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 NUDT22Q9BRQ3 303 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 EBF2Q9HAK2 575 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 PCDHGB2Q9Y5G2 931 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 GLDCP23378 1020 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 SLC6A6P31641 620 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 GNMTQ14749 295 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 AGTRAPQ6RW13 159 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 WDR53Q7Z5U6 358 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 TPPP3Q9BW30 176 aa17.12■□□□□ 0.33
CACNA1A-227ENST00000636549 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 KNG1P01042 644 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 LCATP04180 440 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 ABHD2P08910 425 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 HOXB9P17482 250 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 PAX3P23760 479 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 SEC23BQ15437 767 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 C18orf21Q32NC0 220 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 ARRDC3Q96B67 414 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 WDPCPO95876 746 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 MAP4K2Q12851 820 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 HNRNPA0Q13151 305 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 HAPLN3Q96S86 360 aa17.11■□□□□ 0.33
CACNA1A-227ENST00000636549 CCDC28BQ9BUN5 200 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms