RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PELOQ9BRX2 385 aaKnown RBP16.64■□□□□ 0.25
PNKP-225ENST00000636214 IPPKQ9H8X2 491 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 COQ3Q9NZJ6 369 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 TMCO1Q9UM00 188 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 PPT2Q9UMR5 302 aa16.64■□□□□ 0.25
PNKP-225ENST00000636214 LRBAP50851 2863 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 FGF17O60258 216 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 OR10H2O60403 315 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 SMIM24O75264 130 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 OR6B1O95007 311 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 ACSL3O95573 720 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 P04436 131 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 SNRPB2P08579 225 aaKnown RBP16.63■□□□□ 0.25
PNKP-225ENST00000636214 GRNP28799 593 aaKnown RBP16.63■□□□□ 0.25
PNKP-225ENST00000636214 PTGER4P35408 488 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 STT3AP46977 705 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 SERPINB9P50453 376 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 CCNG1P51959 295 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 RPS13P62277 151 aaKnown RBP16.63■□□□□ 0.25
PNKP-225ENST00000636214 TNFRSF17Q02223 184 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 TTC19Q6DKK2 380 aaPredicted RBP16.63■□□□□ 0.25
PNKP-225ENST00000636214 RGS9BPQ6ZS82 235 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 GDF7Q7Z4P5 450 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 SLC22A16Q86VW1 577 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 OR4N5Q8IXE1 308 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 ZCCHC7Q8N3Z6 543 aaKnown RBP16.63■□□□□ 0.25
PNKP-225ENST00000636214 C16orf52Q8NHV5 167 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 FAM57AQ8TBR7 257 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 SLC22A8Q8TCC7 542 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 PHF10Q8WUB8 498 aaKnown RBP16.63■□□□□ 0.25
PNKP-225ENST00000636214 IFT81Q8WYA0 676 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 ANKRD9Q96BM1 317 aaPredicted RBP16.63■□□□□ 0.25
PNKP-225ENST00000636214 SGCZQ96LD1 299 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 PHF12Q96QT6 1004 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 FMO2Q99518 471 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 SORBS1Q9BX66 1292 aaKnown RBP16.63■□□□□ 0.25
PNKP-225ENST00000636214 TSC22D4Q9Y3Q8 395 aa16.63■□□□□ 0.25
PNKP-225ENST00000636214 H0YIV9 168 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 PLPP1O14494 284 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 KRT38O76015 456 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 CLDN9O95484 217 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 ALDOAP04075 364 aaKnown RBP16.62■□□□□ 0.25
PNKP-225ENST00000636214 ALOX15P16050 662 aaPredicted RBP16.62■□□□□ 0.25
PNKP-225ENST00000636214 TNFRSF8P28908 595 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 PPIAP62937 165 aaKnown RBP16.62■□□□□ 0.25
PNKP-225ENST00000636214 FOLH1Q04609 750 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 TSNAXIP1Q2TAA8 658 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 TMEM211Q6ICI0 200 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 C3P1Q6ZMU1 363 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 FAM47EQ6ZV65 393 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 NUDT13Q86X67 352 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 DOLPP1Q86YN1 238 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 RNF175Q8N4F7 328 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 PTGR2Q8N8N7 351 aaPredicted RBP16.62■□□□□ 0.25
PNKP-225ENST00000636214 GOLM1Q8NBJ4 401 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 MTFMTQ96DP5 389 aaKnown RBP16.62■□□□□ 0.25
PNKP-225ENST00000636214 SENP5Q96HI0 755 aaPredicted RBP16.62■□□□□ 0.25
PNKP-225ENST00000636214 FAM173AQ9BQD7 235 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 CNPPD1Q9BV87 410 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 SACM1LQ9NTJ5 587 aa16.62■□□□□ 0.25
PNKP-225ENST00000636214 IQANK1A0A1B0GTG1 560 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 TMEM200CA6NKL6 621 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 FAM166BA8MTA8 275 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 ZNHIT1O43257 154 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 KLK8O60259 260 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 PDE9AO76083 593 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 CTAGE8P0CG41 777 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 NR2F6P10588 404 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 IGLV3-21P80748 117 aaPredicted RBP16.61■□□□□ 0.25
PNKP-225ENST00000636214 CUL3Q13618 768 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 ZNF750Q32MQ0 723 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 CMPK2Q5EBM0 449 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 TECRLQ5HYJ1 363 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 NDUFAF5Q5TEU4 345 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 C6orf163Q5TEZ5 329 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 SLC29A4Q7RTT9 530 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 CTAGE4Q8IX94 777 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 ST13P4Q8IZP2 240 aaPredicted RBP16.61■□□□□ 0.25
PNKP-225ENST00000636214 MMGT1Q8N4V1 131 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 ZNF321PQ8N8H1 164 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 OR2M7Q8NG81 312 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 NUBPLQ8TB37 319 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 ZNF721Q8TF20 911 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 CA5BP1Q8WTZ4 195 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 SLC44A1Q8WWI5 657 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 PHF21BQ96EK2 531 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 PAFAH2Q99487 392 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 SERPINI1Q99574 410 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 DEFB127Q9H1M4 99 aa16.61■□□□□ 0.25
PNKP-225ENST00000636214 TP63Q9H3D4 680 aaPredicted RBP16.61■□□□□ 0.25
PNKP-225ENST00000636214 CDC42EP4Q9H3Q1 356 aaKnown RBP16.61■□□□□ 0.25
PNKP-225ENST00000636214 NOL11Q9H8H0 719 aaKnown RBP16.61■□□□□ 0.25
PNKP-225ENST00000636214 HMX2A2RU54 273 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 LRRC14BA6NHZ5 514 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 G3V3Y1 287 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 SIX3O95343 332 aaPredicted RBP16.6■□□□□ 0.25
PNKP-225ENST00000636214 ETHE1O95571 254 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 CNR1P21554 472 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 CNTFP26441 200 aa16.6■□□□□ 0.25
PNKP-225ENST00000636214 HNRNPH2P55795 449 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms