RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TCEANCQ8N8B7 351 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 NLGN4YQ8NFZ3 816 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 TMEM163Q8TC26 289 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 WBP2Q969T9 261 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 MARVELD3Q96A59 401 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 PKP4Q99569 1192 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 KATNB1Q9BVA0 655 aa14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 PAK6Q9NQU5 681 aaPredicted RBP14.11□□□□□ -0.15
CACNA1A-220ENST00000635988 CACNB4O00305 520 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 FFAR1O14842 300 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 FURINP09958 794 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 DDX5P17844 614 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 FEN1P39748 380 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 AP2S1P53680 142 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 WNT4P56705 351 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 RRAS2P62070 204 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 RPS13P62277 151 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 ALDH6A1Q02252 535 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 MRPL28Q13084 256 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 TRIM71Q2Q1W2 868 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 C3orf38Q5JPI3 329 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 RTP2Q5QGT7 225 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 MED27Q6P2C8 311 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 UBE2J2Q8N2K1 259 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 SPERTQ8NA61 448 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 AP2M1Q96CW1 435 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 MED8Q96G25 268 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 HYLS1Q96M11 299 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 SOSTQ9BQB4 213 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 MARVELD1Q9BSK0 173 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 POLDIP3Q9BY77 421 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 PRRG3Q9BZD7 231 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 PPP1R3EQ9H7J1 279 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 B3GNT2Q9NY97 397 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 TEKT2Q9UIF3 430 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 ACSL6Q9UKU0 697 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 PPIL1Q9Y3C6 166 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 SPIN1Q9Y657 262 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 LOC105371267A0A1B0GV96 52 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 HEPACAM2A8MVW5 462 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 PITPNM1O00562 1244 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 SHOXO15266 292 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 LYRM1O43325 122 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 SGTAO43765 313 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 SH3BGRLO75368 114 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 PSIP1O75475 530 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 SOX14O95416 240 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 RECKO95980 971 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF30P17039 623 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 MAN2A2P49641 1150 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 PTSQ03393 145 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 TPBGQ13641 420 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 ARHGEF6Q15052 776 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 WSCD2Q2TBF2 565 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 OR52I1Q8NGK6 324 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 C1GALT1C1Q96EU7 318 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF717Q9BY31 904 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 TMPRSS11EQ9UL52 423 aa14.1□□□□□ -0.15
CACNA1A-220ENST00000635988 ARHGEF33A8MVX0 844 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 B8ZZF3 427 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 C5orf58C9J3I9 102 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 SLCO2B1O94956 709 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 H1F0P07305 194 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 ACADMP11310 421 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 ELAVL4P26378 380 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 FGF9P31371 208 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 DGKGP49619 791 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 LIM2P55344 173 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 C2orf80Q0P641 193 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 RIN1Q13671 783 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 PUM1Q14671 1186 aaKnown RBP eCLIP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 SF3A2Q15428 464 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 ATAT1Q5SQI0 421 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 APCDD1Q8J025 514 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 SDR16C5Q8N3Y7 309 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 OR2AP1Q8NGE2 309 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 APOBEC4Q8WW27 367 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 MYNNQ9NPC7 610 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 MARCH5Q9NX47 278 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 MRPL39Q9NYK5 338 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 STOX2Q9P2F5 926 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 KCNE2Q9Y6J6 123 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 A0A1W2PRB8 838 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 PRR23AA6NEV1 266 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 FAM227AF5H4B4 570 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 FOXE1O00358 373 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 CATP04040 527 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 ASGR1P07306 291 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 APEX1P27695 318 aaKnown RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 SOAT1P35610 550 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 INPP1P49441 399 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 DGKEP52429 567 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 COX10Q12887 443 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 FOXD4Q12950 439 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 NDUFA9Q16795 377 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 CRTC2Q53ET0 693 aaPredicted RBP14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 PAQR6Q6TCH4 344 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 IDO2Q6ZQW0 420 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 QSOX2Q6ZRP7 698 aa14.09□□□□□ -0.15
CACNA1A-220ENST00000635988 PDZD3Q86UT5 571 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms