RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 UBFD1O14562 309 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 TMPRSS11DO60235 418 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 OR10H2O60403 315 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 AIFM1O95831 613 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 ITGAMP11215 1152 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 DRD2P14416 443 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 ALOX15P16050 662 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 DDX5P17844 614 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 TNNI3P19429 210 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 NR1D1P20393 614 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 PRPH2P23942 346 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 PIK3R1P27986 724 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 TPP2P29144 1249 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 ETV4P43268 484 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 SERPINB4P48594 390 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 HNRNPH2P55795 449 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 HEPACAMQ14CZ8 416 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 SPDYAQ5MJ70 313 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 NDUFAF5Q5TEU4 345 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 SLC6A19Q695T7 634 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 CUZD1Q86UP6 607 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 CPAMD8Q8IZJ3 1885 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 ARMC10Q8N2F6 343 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 C1orf52Q8N6N3 182 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 SIRT6Q8N6T7 355 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 GOLGA6L1Q8N7Z2 621 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 NFAM1Q8NET5 270 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 OR5L2Q8NGL0 311 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 CHTF18Q8WVB6 975 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 SORBS1Q9BX66 1292 aaKnown RBP13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 DEFB126Q9BYW3 111 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 ACPTQ9BZG2 426 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 STMN3Q9NZ72 180 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 EHD3Q9NZN3 535 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 TIMM22Q9Y584 194 aa13.09□□□□□ -0.31
SNRPA1-216ENST00000626000 A0A1W2PR48 441 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 OR5H15A6NDH6 313 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 A8MUI8 341 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 K7EM74 188 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 PCDH7O60245 1069 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 LDB3O75112 727 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 ZFAND5O76080 213 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 SERPINE1P05121 402 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 SLC35E2P0CK97 266 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 TIA1P31483 386 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 HNRNPFP52597 415 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 FOLH1Q04609 750 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 SPRED3Q2MJR0 410 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 ACER2Q5QJU3 275 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 RPUSD3Q6P087 351 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 LINC00696Q6ZRV3 163 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 IKBIPQ70UQ0 350 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 HDXQ7Z353 690 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 CLNKQ7Z7G1 428 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 RPS19BP1Q86WX3 136 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 RBMXL3Q8N7X1 1067 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 TMEM52Q8NDY8 209 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 OR4K14Q8NGD5 310 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 OR1N1Q8NGS0 311 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 DNAJB14Q8TBM8 379 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 ANKRD9Q96BM1 317 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 FBXL20Q96IG2 436 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 MESP1Q9BRJ9 268 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 C12orf65Q9H3J6 166 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 VIPAS39Q9H9C1 493 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 KCNK9Q9NPC2 374 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 GIMAP4Q9NUV9 329 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 NKIRAS1Q9NYS0 192 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 TMED5Q9Y3A6 229 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 PCDHGB6Q9Y5F9 930 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 PCDHA9Q9Y5H5 950 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 CLDN16Q9Y5I7 305 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 CFAP46Q8IYW2 2715 aa13.08□□□□□ -0.32
SNRPA1-216ENST00000626000 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 TTLL8A6PVC2 850 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 C17orf105B2RV13 164 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 FGF17O60258 216 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 SORBS2O94875 1100 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 DHRS4L1P0CG22 281 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 ZNF763Q0D2J5 394 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 ARL13AQ5H913 290 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 TCHHL1Q5QJ38 904 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 HHATQ5VTY9 493 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 KANK2Q63ZY3 851 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 C18orf63Q68DL7 685 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 SLC48A1Q6P1K1 146 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 HSDL2Q6YN16 418 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 ATCAYQ86WG3 371 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 TRIM42Q8IWZ5 723 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 GPALPP1Q8IXQ4 340 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 APCDD1LQ8NCL9 501 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 KCNA7Q96RP8 456 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 HBEGFQ99075 208 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 UTP23Q9BRU9 249 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 ACBD3Q9H3P7 528 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 AGPAT4Q9NRZ5 378 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 TRAF6Q9Y4K3 522 aa13.07□□□□□ -0.32
SNRPA1-216ENST00000626000 ZNF780BQ9Y6R6 833 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms