RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 MTDHQ86UE4 582 aaKnown RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 AFAP1L2Q8N4X5 818 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 TBC1D19Q8N5T2 526 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 APCDD1LQ8NCL9 501 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ZNF669Q96BR6 464 aaPredicted RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 RMND5BQ96G75 393 aaPredicted RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 SIGLEC10Q96LC7 697 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ANKRD27Q96NW4 1050 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 HAUS8Q9BT25 410 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 CADM1Q9BY67 442 aaKnown RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 POLDIP3Q9BY77 421 aaKnown RBP7.29□□□□□ -1.24
CLK1-215ENST00000621181 DEFB127Q9H1M4 99 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 CXXC4Q9H2H0 198 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 PARVBQ9HBI1 364 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 NPHS2Q9NP85 383 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 TIMMDC1Q9NPL8 285 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 PRDM9Q9NQV7 894 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 ARL8BQ9NVJ2 186 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 HPF1Q9NWY4 346 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 KCMF1Q9P0J7 381 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 PDE10AQ9Y233 779 aa7.29□□□□□ -1.24
CLK1-215ENST00000621181 FLNAP21333 2647 aaKnown RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 IQANK1A0A1B0GTG1 560 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 TCRBV16S1A1N1A0A5B0 115 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 URADA6NGE7 173 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 FAM159BA6NKW6 160 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 FAM166BA8MTA8 275 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 EIF3FO00303 357 aaPredicted RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 SLC16A5O15375 505 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 KLK8O60259 260 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 HNRNPCL1O60812 293 aaKnown RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 DNAJB6O75190 326 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 C8GP07360 202 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 HIST1H2AGP0C0S8 130 aaPredicted RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 RNH1P13489 461 aaKnown RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 TPSB2P20231 275 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 HIST1H2ADP20671 130 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 CALB2P22676 271 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 ACVR2AP27037 513 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 GCKP35557 465 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 HNF4AP41235 474 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 SLC1A2P43004 574 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 ZFP36L2P47974 494 aaKnown RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 SERPINB4P48594 390 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 RGS4P49798 205 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 SSR4P51571 173 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 PPIAP62937 165 aaKnown RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 TPSAB1Q15661 275 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 GXYLT1Q4G148 440 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 EMC4Q5J8M3 183 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 ZNF585AQ6P3V2 769 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 LCTLQ6UWM7 567 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 B3GNT6Q6ZMB0 384 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 CYS1Q717R9 158 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 ARMC10Q8N2F6 343 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 PSD4Q8NDX1 1056 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 B3GNT7Q8NFL0 401 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 ABHD11Q8NFV4 315 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 OR5M9Q8NGP3 310 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 CREB3L4Q8TEY5 395 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 PYCR2Q96C36 320 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 LRRC39Q96DD0 335 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 HIST1H2AHQ96KK5 128 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 HIST1H2AJQ99878 128 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 H2AFJQ9BTM1 129 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 CLEC4MQ9H2X3 399 aaPredicted RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 RHBGQ9H310 441 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 DENND2DQ9H6A0 471 aaPredicted RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 PNPLA3Q9NST1 481 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 ST6GALNAC2Q9UJ37 374 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 TRMT6Q9UJA5 497 aaKnown RBP7.28□□□□□ -1.24
CLK1-215ENST00000621181 ZFP69BQ9UJL9 534 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 ADAMTS6Q9UKP5 1117 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 EDARQ9UNE0 448 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 STK38LQ9Y2H1 464 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 PLLPQ9Y342 182 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 COMMD10Q9Y6G5 202 aa7.28□□□□□ -1.24
CLK1-215ENST00000621181 IGKV3D-11A0A0A0MRZ8 115 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 TRBC2A0A5B9 178 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 WDR91A4D1P6 747 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 OR14I1A6ND48 311 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 TMEM200CA6NKL6 621 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 CTAG2O75638 210 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 TROVE2P10155 538 aaKnown RBP eCLIP7.27□□□□□ -1.25
CLK1-215ENST00000621181 NPPBP16860 134 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 BGNP21810 368 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 NR0B1P51843 470 aaKnown RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 SP140Q13342 867 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 CRYMQ14894 314 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 ARMC3Q5W041 872 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 STEAP4Q687X5 459 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 UGT3A1Q6NUS8 523 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 TIFABQ6ZNK6 161 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 WDR53Q7Z5U6 358 aaPredicted RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 SLC22A16Q86VW1 577 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 ZZZ3Q8IYH5 903 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 MYO1HQ8N1T3 1032 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 NFAM1Q8NET5 270 aaPredicted RBP7.27□□□□□ -1.25
CLK1-215ENST00000621181 CALML6Q8TD86 181 aa7.27□□□□□ -1.25
CLK1-215ENST00000621181 EEF1AKMT1Q8WVE0 214 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms