RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 OPN1SWP03999 348 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 CELA2BP08218 269 aaPredicted RBP18.15■□□□□ 0.5
MMP28-204ENST00000615136 GLULP15104 373 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 AKT2P31751 481 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 ZNF829Q3KNS6 432 aaPredicted RBP18.15■□□□□ 0.5
MMP28-204ENST00000615136 TRIM73Q86UV7 250 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 TSPYL5Q86VY4 417 aaPredicted RBP18.15■□□□□ 0.5
MMP28-204ENST00000615136 ANKRD13BQ86YJ7 626 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 FAM160A2Q8N612 972 aaPredicted RBP18.15■□□□□ 0.5
MMP28-204ENST00000615136 FAR1Q8WVX9 515 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 DGCR6LQ9BY27 220 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 EPS8L2Q9H6S3 715 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 TPRKBQ9Y3C4 175 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 HEBP2Q9Y5Z4 205 aa18.15■□□□□ 0.5
MMP28-204ENST00000615136 ZNF99A8MXY4 864 aaPredicted RBP18.14■□□□□ 0.49
MMP28-204ENST00000615136 FOXD2O60548 495 aaPredicted RBP18.14■□□□□ 0.49
MMP28-204ENST00000615136 B4GALT2O60909 372 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 CHRNB1P11230 501 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 FMO3P31513 532 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 SSR2P43308 183 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 SELENOWP63302 87 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 IL1RL1Q01638 556 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 EMX1Q04741 257 aaPredicted RBP18.14■□□□□ 0.49
MMP28-204ENST00000615136 RBBP4Q09028 425 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 SFSWAPQ12872 951 aaKnown RBP18.14■□□□□ 0.49
MMP28-204ENST00000615136 ELOAQ14241 798 aaKnown RBP18.14■□□□□ 0.49
MMP28-204ENST00000615136 GAS6Q14393 721 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 MAD2L1BPQ15013 274 aaPredicted RBP18.14■□□□□ 0.49
MMP28-204ENST00000615136 ZNF425Q6IV72 752 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 TSEN54Q7Z6J9 526 aaKnown RBP18.14■□□□□ 0.49
MMP28-204ENST00000615136 ATG16L2Q8NAA4 619 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 FLVCR1-AS1Q8TAF5 88 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 RLN3Q8WXF3 142 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 BORCS5Q969J3 196 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 MS4A6EQ96DS6 147 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 GABARAPL3Q9BY60 117 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 WARS2Q9UGM6 360 aaKnown RBP18.14■□□□□ 0.49
MMP28-204ENST00000615136 SNX8Q9Y5X2 465 aa18.14■□□□□ 0.49
MMP28-204ENST00000615136 KNL1Q8NG31 2342 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 TNFRSF10CO14798 259 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 NDUFS2O75306 463 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 INMTO95050 263 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 F3P13726 295 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 ACVR2AP27037 513 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 CHI3L1P36222 383 aaPredicted RBP18.13■□□□□ 0.49
MMP28-204ENST00000615136 RPS26P62854 115 aaKnown RBP18.13■□□□□ 0.49
MMP28-204ENST00000615136 ABATP80404 500 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 FADDQ13158 208 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 MOGQ16653 247 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 PRRT3Q5FWE3 981 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 OR8K5Q8NH50 307 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 NFKBIDQ8NI38 313 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 BCL7BQ9BQE9 202 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 TMEM38AQ9H6F2 299 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 APOBEC3BQ9UH17 382 aaKnown RBP18.13■□□□□ 0.49
MMP28-204ENST00000615136 PCDHGB3Q9Y5G1 929 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 GLOD5A6NK44 160 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 ERI3O43414 337 aaKnown RBP18.13■□□□□ 0.49
MMP28-204ENST00000615136 MRPS14O60783 128 aaKnown RBP18.13■□□□□ 0.49
MMP28-204ENST00000615136 SRFP11831 508 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 TNFRSF1BP20333 461 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 EPHA2P29317 976 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 CD6P30203 668 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 PTGER1P34995 402 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 PCBP4P57723 403 aaKnown RBP18.13■□□□□ 0.49
MMP28-204ENST00000615136 HSPB3Q12988 150 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 AQP6Q13520 282 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 HEPACAMQ14CZ8 416 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 ADPRMQ3LIE5 342 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 GCNT6Q5T4J0 391 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 ABI3BPQ7Z7G0 1075 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 CCDC71Q8IV32 467 aaPredicted RBP18.13■□□□□ 0.49
MMP28-204ENST00000615136 HSPBAP1Q96EW2 488 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 GPR174Q9BXC1 333 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 CCDC90BQ9GZT6 254 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 RAD21L1Q9H4I0 556 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 PRDM7Q9NQW5 492 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 SCN3BQ9NY72 215 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 OR6C2Q9NZP2 312 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 PCDHGA4Q9Y5G9 962 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 PCDHGA10Q9Y5H3 936 aa18.13■□□□□ 0.49
MMP28-204ENST00000615136 GON4LQ3T8J9 2241 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 PDPK1O15530 556 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 CMPK1P30085 196 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 RRM2P31350 389 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 GRK3P35626 688 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 YPEL5P62699 121 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 EEF1A2Q05639 463 aaKnown RBP18.12■□□□□ 0.49
MMP28-204ENST00000615136 NPRL3Q12980 569 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 PROX2Q3B8N5 592 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 LRIT3Q3SXY7 679 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 TOR1AIP1Q5JTV8 583 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 CCDC80Q76M96 950 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 ZNF687Q8N1G0 1237 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 QRFPRQ96P65 431 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 SRMSQ9H3Y6 488 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 CCNB1IP1Q9NPC3 277 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 SIRT3Q9NTG7 399 aaPredicted RBP18.12■□□□□ 0.49
MMP28-204ENST00000615136 GALNT8Q9NY28 637 aa18.12■□□□□ 0.49
MMP28-204ENST00000615136 NDUFAF4Q9P032 175 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms