RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 NCF1P14598 390 aaPredicted RBP21.54■■□□□ 1.04
MMP28-203ENST00000612672 TNNI3P19429 210 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 HSPB2Q16082 182 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 CAMKMTQ7Z624 323 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 FBXW8Q8N3Y1 598 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 OR10G3Q8NGC4 313 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 ESAMQ96AP7 390 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 CFAP36Q96G28 342 aa21.54■■□□□ 1.04
MMP28-203ENST00000612672 CORO1CQ9ULV4 474 aaPredicted RBP21.54■■□□□ 1.04
MMP28-203ENST00000612672 CHCHD2Q9Y6H1 151 aaPredicted RBP21.54■■□□□ 1.04
MMP28-203ENST00000612672 FAM47E-STBD1D6RA91 191 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 DNALI1O14645 258 aaPredicted RBP21.53■■□□□ 1.04
MMP28-203ENST00000612672 H2AFYO75367 372 aaKnown RBP21.53■■□□□ 1.04
MMP28-203ENST00000612672 TAS2R39P59534 338 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 KCNJ2P63252 427 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 CRYZQ08257 329 aaKnown RBP21.53■■□□□ 1.04
MMP28-203ENST00000612672 SLC22A10Q63ZE4 541 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 OR5L2Q8NGL0 311 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 LINC01560Q8TB33 94 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 PPWD1Q96BP3 646 aaKnown RBP21.53■■□□□ 1.04
MMP28-203ENST00000612672 SPACA9Q96E40 222 aaPredicted RBP21.53■■□□□ 1.04
MMP28-203ENST00000612672 ARSGQ96EG1 525 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 C18orf12Q96KH6 178 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 COPS7BQ9H9Q2 264 aaPredicted RBP21.53■■□□□ 1.04
MMP28-203ENST00000612672 CNOT11Q9UKZ1 510 aaKnown RBP21.53■■□□□ 1.04
MMP28-203ENST00000612672 CHMP2BQ9UQN3 213 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 PCDHGB3Q9Y5G1 929 aa21.53■■□□□ 1.04
MMP28-203ENST00000612672 FBN1P35555 2871 aaKnown RBP21.52■■□□□ 1.04
MMP28-203ENST00000612672 A0A088AWK7 358 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 ANKDD1BA6NHY2 528 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 DVL2O14641 736 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 SH3BGRLO75368 114 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 EPORP19235 508 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 ZNF10P21506 573 aaPredicted RBP21.52■■□□□ 1.04
MMP28-203ENST00000612672 ELK3P41970 407 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 HNMTP50135 292 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 AGFG1P52594 562 aaKnown RBP21.52■■□□□ 1.04
MMP28-203ENST00000612672 IGLV3-21P80748 117 aaPredicted RBP21.52■■□□□ 1.04
MMP28-203ENST00000612672 EFTUD2Q15029 972 aaKnown RBP eCLIP21.52■■□□□ 1.04
MMP28-203ENST00000612672 CHSY3Q70JA7 882 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 PRIMA1Q86XR5 153 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 KRT78Q8N1N4 520 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 NUBPLQ8TB37 319 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 SENP5Q96HI0 755 aaPredicted RBP21.52■■□□□ 1.04
MMP28-203ENST00000612672 SORBS1Q9BX66 1292 aaKnown RBP21.52■■□□□ 1.04
MMP28-203ENST00000612672 LYRM4Q9HD34 91 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 ACKR4Q9NPB9 350 aa21.52■■□□□ 1.04
MMP28-203ENST00000612672 EPPINO95925 133 aa21.51■■□□□ 1.03
MMP28-203ENST00000612672 ATP5A1P25705 553 aaKnown RBP21.51■■□□□ 1.03
MMP28-203ENST00000612672 GSTM2P28161 218 aa21.51■■□□□ 1.03
MMP28-203ENST00000612672 DUSP8Q13202 625 aa21.51■■□□□ 1.03
MMP28-203ENST00000612672 SERTAD2Q14140 314 aa21.51■■□□□ 1.03
MMP28-203ENST00000612672 DOC2AQ14183 400 aa21.51■■□□□ 1.03
MMP28-203ENST00000612672 STEAP4Q687X5 459 aa21.51■■□□□ 1.03
MMP28-203ENST00000612672 ZC3HC1Q86WB0 502 aaKnown RBP21.51■■□□□ 1.03
MMP28-203ENST00000612672 ACOT4Q8N9L9 421 aa21.51■■□□□ 1.03
MMP28-203ENST00000612672 GABPB2Q8TAK5 448 aaPredicted RBP21.51■■□□□ 1.03
MMP28-203ENST00000612672 COPS7AQ9UBW8 275 aa21.51■■□□□ 1.03
MMP28-203ENST00000612672 BOKQ9UMX3 212 aaPredicted RBP21.51■■□□□ 1.03
MMP28-203ENST00000612672 FAM95CA0A1B0GW59 222 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 SYNDIG1LA6NDD5 238 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 PRKRAO75569 313 aaKnown RBP21.5■■□□□ 1.03
MMP28-203ENST00000612672 WISP3O95389 354 aaPredicted RBP21.5■■□□□ 1.03
MMP28-203ENST00000612672 INHBBP09529 407 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 PEX19P40855 299 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 STT3AP46977 705 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 KEAP1Q14145 624 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 POU4F3Q15319 338 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 DCST1Q5T197 706 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 BICRALQ6AI39 1079 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 SPATA6LQ8N4H0 392 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 NKAPQ8N5F7 415 aaKnown RBP21.5■■□□□ 1.03
MMP28-203ENST00000612672 FAM13CQ8NE31 585 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 ANKRD7Q92527 254 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 JSRP1Q96MG2 331 aaPredicted RBP21.5■■□□□ 1.03
MMP28-203ENST00000612672 TIMP4Q99727 224 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 MDFIQ99750 246 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 MS4A8Q9BY19 250 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 EPB41L4BQ9H329 900 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 GPRC5BQ9NZH0 403 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 CTNNAL1Q9UBT7 734 aa21.5■■□□□ 1.03
MMP28-203ENST00000612672 C15orf38-AP3S2A0A0A6YYH1 394 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 KIAA1324LA8MWY0 1029 aaPredicted RBP21.49■■□□□ 1.03
MMP28-203ENST00000612672 CLPSP04118 112 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 FBXO45P0C2W1 286 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 EPXP11678 715 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 CD53P19397 219 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 IVDP26440 423 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 KCNC1P48547 511 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 HSPA7P48741 367 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 TGFBIQ15582 683 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 CLEC9AQ6UXN8 241 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 FRA10AC1Q70Z53 315 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 ADAMTSL2Q86TH1 951 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 RNF175Q8N4F7 328 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 SLC22A8Q8TCC7 542 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 WDR34Q96EX3 536 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 KCNC2Q96PR1 638 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 NAT9Q9BTE0 207 aa21.49■■□□□ 1.03
MMP28-203ENST00000612672 EHD1Q9H4M9 534 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms