RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	RIN1	Q13671	783 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	ADNP2	Q6IQ32	1131 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	REEP3	Q6NUK4	255 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PAQR6	Q6TCH4	344 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	UNC5D	Q6UXZ4	953 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	QSOX2	Q6ZRP7	698 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	LAPTM4B	Q86VI4	370 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	FAM26E	Q8N5C1	309 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	TCEANC	Q8N8B7	351 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	OR52I1	Q8NGK6	324 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	ASZ1	Q8WWH4	475 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	MTERF3	Q96E29	417 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	OR4K3	Q96R72	315 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PKP4	Q99569	1192 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	KATNB1	Q9BVA0	655 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	POLDIP3	Q9BY77	421 aa	Known RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PRRG3	Q9BZD7	231 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PPP1R3E	Q9H7J1	279 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	MYNN	Q9NPC7	610 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	STOX2	Q9P2F5	926 aa	Predicted RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130		A0A1W2PQ72	361 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	ZSCAN5B	A6NJL1	495 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	HEPACAM2	A8MVW5	462 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	ORC5	O43913	435 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	ACADM	P11310	421 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	PSKH1	P11801	424 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	HMGA1	P17096	107 aa	Known RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	DGKE	P52429	567 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	AP2S1	P53680	142 aa	Predicted RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	WNT4	P56705	351 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	RRAS2	P62070	204 aa	Predicted RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	ALDH6A1	Q02252	535 aa	Known RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	PTS	Q03393	145 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	ESCO2	Q56NI9	601 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	DCST1	Q5T197	706 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	SERPINA13P	Q6UXR4	307 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	CEACAM20	Q6UY09	585 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	APCDD1	Q8J025	514 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130		Q8N402	240 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	PLA2G15	Q8NCC3	412 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	OR4M1	Q8NGD0	313 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	TMEM163	Q8TC26	289 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	MED8	Q96G25	268 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	POLR2J3	Q9H1A7	115 aa	Known RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	PAK6	Q9NQU5	681 aa	Predicted RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	B3GNT2	Q9NY97	397 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	TES	Q9UGI8	421 aa	Known RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	TMPRSS11E	Q9UL52	423 aa		13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130	SPIN1	Q9Y657	262 aa	Predicted RBP	13.08	□□□□□ -0.32
UBE2F-223	ENST00000612130		A0A1W2PQ67	120 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	TMEM129	A0AVI4	362 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	IRGM	A1A4Y4	181 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SLC30A4	O14863	429 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SHOX	O15266	292 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	OR10H3	O60404	316 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SH3BGRL	O75368	114 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SLCO2B1	O94956	709 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	MYL12A	P19105	171 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	LHCGR	P22888	699 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SSTR4	P31391	388 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SEC23B	Q15437	767 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	DUSP6	Q16828	381 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	MPEG1	Q2M385	716 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	ATAT1	Q5SQI0	421 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	MED27	Q6P2C8	311 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	COMMD6	Q7Z4G1	85 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SPERT	Q8NA61	448 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	OR2AP1	Q8NGE2	309 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	OR56A3	Q8NH54	315 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	OR5AK3P	Q8NH89	298 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	AP2M1	Q96CW1	435 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	ECHDC3	Q96DC8	303 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	PDXP	Q96GD0	296 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	MARVELD1	Q9BSK0	173 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	PRM3	Q9NNZ6	103 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	TMEM161A	Q9NX61	479 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	GSTK1	Q9Y2Q3	226 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	FAM240B	A0A1B0GVZ2	78 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130		B8ZZF3	427 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SGK494	L7N484	410 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	LYRM1	O43325	122 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	ZNF821	O75541	412 aa	Predicted RBP	13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	H1F0	P07305	194 aa	Known RBP	13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	ASGR1	P07306	291 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	NR2F6	P10588	404 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	CYP2A6	P11509	494 aa	Predicted RBP	13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	FGF9	P31371	208 aa	Predicted RBP	13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SOAT1	P35610	550 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	MAN2A2	P49641	1150 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SMIM11A	P58511	58 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	TPBG	Q13641	420 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	SF3A2	Q15428	464 aa	Known RBP	13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	WSCD2	Q2TBF2	565 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	KLHL22	Q53GT1	634 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	LAMTOR1	Q6IAA8	161 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	FAM71E1	Q6IPT2	247 aa		13.07	□□□□□ -0.32
UBE2F-223	ENST00000612130	KIAA1211L	Q6NV74	962 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms