RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 MED17Q9NVC6 651 aa4.84□□□□□ -1.63
HMGB1P51-201ENST00000605166 SNX6Q9UNH7 406 aa4.84□□□□□ -1.63
HMGB1P51-201ENST00000605166 DDX49Q9Y6V7 483 aaKnown RBP4.84□□□□□ -1.63
HMGB1P51-201ENST00000605166 PTPRUQ92729 1446 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 KDRP35968 1356 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 NEDD4P46934 1319 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 SH3PXD2BA1X283 911 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 CSDE1O75534 798 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 SPAG6O75602 509 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 MFN2O95140 757 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 PRAMEF12O95522 483 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 CRYAAP02489 173 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 RPS2P15880 293 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 PAICSP22234 425 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 DPP4P27487 766 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 PTPN4P29074 926 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 FCGR2BP31994 310 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 ADRA1AP35348 466 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 THBS3P49746 956 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 BACE1P56817 501 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 NANOS2P60321 138 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 CDKL1Q00532 357 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 SLC36A3Q495N2 470 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 NADK2Q4G0N4 442 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 LRRC8BQ6P9F7 803 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 TRIM65Q6PJ69 517 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 CES3Q6UWW8 571 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 GDPD4Q6W3E5 623 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 Q6ZVQ6 151 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 CUZD1Q86UP6 607 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 WDR49Q8IV35 697 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 DND1Q8IYX4 353 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 GCNT2Q8N0V5 402 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 RFLNBQ8N5W9 214 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 STKLD1Q8NE28 680 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 SHC3Q92529 594 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 MCHR2Q969V1 340 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 PINX1Q96BK5 328 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 PCED1BQ96HM7 432 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 MAGED4Q96JG8 741 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 C2orf48Q96LS8 159 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 DEFB118Q96PH6 123 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 NDUFAF3Q9BU61 184 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 PAPOLGQ9BWT3 736 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 MRPL13Q9BYD1 178 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 POLR1EQ9GZS1 481 aaKnown RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 RMND5AQ9H871 391 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 WDR76Q9H967 626 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 GDF3Q9NR23 364 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 ZNF624Q9P2J8 865 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 ERRFI1Q9UJM3 462 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 FOXJ3Q9UPW0 622 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 CHMP2BQ9UQN3 213 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 KIAA1210Q9ULL0 1709 aa4.83□□□□□ -1.64
HMGB1P51-201ENST00000605166 TRIP12Q14669 1992 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 A0A0G2JLW4 131 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 SHISA7A6NL88 538 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 B4GAT1O43505 415 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 FGF17O60258 216 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 LRCH4O75427 683 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 CDC123O75794 336 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 C4BPBP20851 252 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 GIFP27352 417 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 HTR2AP28223 471 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 PTPN6P29350 595 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 OTX2P32243 289 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 SOX3P41225 446 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 NPY2RP49146 381 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 FHITP49789 147 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 BTG1P62324 171 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 CSNK2BP67870 215 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 POU3F1Q03052 451 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 LRRC74AQ0VAA2 488 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 SNTB2Q13425 540 aaKnown RBP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 RFTN1Q14699 578 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 EFTUD2Q15029 972 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 TEAD2Q15562 447 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 TAB1Q15750 504 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 ZKSCAN8Q15776 578 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 CLPPQ16740 277 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 GTDC1Q4AE62 458 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 C19orf48Q6RUI8 117 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 SH2D5Q6ZV89 423 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 ZNF771Q7L3S4 317 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 SLC22A15Q8IZD6 547 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 MLKLQ8NB16 471 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 OR5AP2Q8NGF4 316 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 OR5T2Q8NGG2 359 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 OR52M1Q8NGK5 317 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 LMO3Q8TAP4 145 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 RAB40CQ96S21 281 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 DCTN5Q9BTE1 182 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 ATAD3AQ9NVI7 634 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 DCAF16Q9NXF7 216 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 P2RX2Q9UBL9 471 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 MIOXQ9UGB7 285 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 WIPI2Q9Y4P8 454 aa4.82□□□□□ -1.64
HMGB1P51-201ENST00000605166 CUX2O14529 1486 aa4.81□□□□□ -1.64
HMGB1P51-201ENST00000605166 KIF7Q2M1P5 1343 aa4.81□□□□□ -1.64
HMGB1P51-201ENST00000605166 SMIM1B2RUZ4 78 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms