RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MDGA2Q7Z553 956 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 CCDC91Q7Z6B0 441 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 SIAH3Q8IW03 269 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 SRFBP1Q8NEF9 429 aaKnown RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 DCAKDQ8WVC6 231 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 RELTQ969Z4 430 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 ANKRD9Q96BM1 317 aaPredicted RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 MTFMTQ96DP5 389 aaKnown RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 SCYL1Q96KG9 808 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 GPR137Q96N19 417 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 NSUN5Q96P11 429 aaKnown RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 CCDC77Q9BR77 488 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 OR8D2Q9GZM6 311 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 ROGDIQ9GZN7 287 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 IPPKQ9H8X2 491 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 TINAGQ9UJW2 476 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 PPIEQ9UNP9 301 aaKnown RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 CLCA3PQ9Y6N3 262 aa12.8□□□□□ -0.36
SCAF1-203ENST00000598359 DIDO1Q9BTC0 2240 aaKnown RBP12.8□□□□□ -0.36
SCAF1-203ENST00000598359 C17orf105B2RV13 164 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 TRIM49D1C9J1S8 452 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 WWP2O00308 870 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 CCL21O00585 134 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 OR7A17O14581 309 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 FGF17O60258 216 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 SLC19A2O60779 497 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 CDH16O75309 829 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 EEDO75530 441 aaKnown RBP12.79□□□□□ -0.36
SCAF1-203ENST00000598359 OR2J2O76002 312 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 ZFAND5O76080 213 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 SCELO95171 688 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 ETHE1O95571 254 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 ARL1P40616 181 aaPredicted RBP12.79□□□□□ -0.36
SCAF1-203ENST00000598359 MEOX1P50221 254 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 HNRNPH2P55795 449 aaKnown RBP12.79□□□□□ -0.36
SCAF1-203ENST00000598359 GPR85P60893 370 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 RCN2Q14257 317 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 PCBP2Q15366 365 aaKnown RBP eCLIP12.79□□□□□ -0.365e-7■■■■□ 23.2
SCAF1-203ENST00000598359 C3AR1Q16581 482 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 LIPJQ5W064 366 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 DGAT2L6Q6ZPD8 337 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 CYP4Z2PQ8N1L4 340 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 ARMC10Q8N2F6 343 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 TMEM132CQ8N3T6 1108 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 TMEM156Q8N614 296 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 OR52B6Q8NGF0 335 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 UCN3Q969E3 161 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 TMEM125Q96AQ2 219 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 RGMAQ96B86 450 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 PPWD1Q96BP3 646 aaKnown RBP12.79□□□□□ -0.36
SCAF1-203ENST00000598359 CCDC120Q96HB5 630 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 NOL11Q9H8H0 719 aaKnown RBP12.79□□□□□ -0.36
SCAF1-203ENST00000598359 TRIM45Q9H8W5 580 aaPredicted RBP12.79□□□□□ -0.36
SCAF1-203ENST00000598359 XPR1Q9UBH6 696 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 VTI1BQ9UEU0 232 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 ATG4BQ9Y4P1 393 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 IKBKGQ9Y6K9 419 aa12.79□□□□□ -0.36
SCAF1-203ENST00000598359 SETD2Q9BYW2 2564 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-203ENST00000598359 ZFHX3Q15911 3703 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 OTOGQ6ZRI0 2925 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 ARHGAP10A1A4S6 786 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 GLOD5A6NK44 160 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 HRKO00198 91 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 OR6B1O95007 311 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 GBAP04062 536 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 SERPINB1P30740 379 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 PIK3CBP42338 1070 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 CA7P43166 264 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 SSR4P51571 173 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 NR0B1P51843 470 aaKnown RBP12.78□□□□□ -0.36
SCAF1-203ENST00000598359 RBPJQ06330 500 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 IL20RBQ6UXL0 311 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 HSDL2Q6YN16 418 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 NCCRP1Q6ZVX7 275 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-203ENST00000598359 TAOK1Q7L7X3 1001 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 TICAM1Q8IUC6 712 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 SULF2Q8IWU5 870 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 FAM98AQ8NCA5 519 aaKnown RBP12.78□□□□□ -0.36
SCAF1-203ENST00000598359 SLC2A12Q8TD20 617 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 ISL2Q96A47 359 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 MAGED4Q96JG8 741 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 ZNF717Q9BY31 904 aaPredicted RBP12.78□□□□□ -0.36
SCAF1-203ENST00000598359 PCDHGA11Q9Y5H2 935 aa12.78□□□□□ -0.36
SCAF1-203ENST00000598359 F8P00451 2351 aa12.77□□□□□ -0.36
SCAF1-203ENST00000598359 A0A0G2JMM0 328 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 A0A1B0GTL3 188 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 A0A1W2PPB8 328 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 A0A1W2PRS3 328 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 TLDC2A0PJX2 215 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 KIR3DP1A8MWS1 328 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 G3V3Y1 287 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 H0YIV9 168 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 ASNA1O43681 348 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 PEX1O43933 1283 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 TMPRSS11DO60235 418 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF354AO60765 605 aaPredicted RBP12.77□□□□□ -0.37
SCAF1-203ENST00000598359 ZNF24P17028 368 aa12.77□□□□□ -0.37
SCAF1-203ENST00000598359 TSPAN8P19075 237 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms