RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 C1QTNF3Q9BXJ4 246 aa14.2□□□□□ -0.14
TRIM28-203ENST00000593582 WDR41Q9HAD4 459 aa14.2□□□□□ -0.14
TRIM28-203ENST00000593582 AHSPQ9NZD4 102 aa14.2□□□□□ -0.14
TRIM28-203ENST00000593582 ERVK-11Q9UQG0 969 aa14.2□□□□□ -0.14
TRIM28-203ENST00000593582 KLF13Q9Y2Y9 288 aaPredicted RBP14.2□□□□□ -0.14
TRIM28-203ENST00000593582 ASB4Q9Y574 426 aa14.2□□□□□ -0.14
TRIM28-203ENST00000593582 DOPEY1Q5JWR5 2465 aa14.2□□□□□ -0.14
TRIM28-203ENST00000593582 TRGV8A0A0C4DH27 118 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 TMEM200CA6NKL6 621 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 CYSRT1A8MQ03 144 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 A8MVJ9 347 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 KLRC4-KLRK1H3BQV0 150 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 TMPRSS11DO60235 418 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 SBK3P0C264 359 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 NR2F6P10588 404 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 ZNF24P17028 368 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 CASP6P55212 293 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 CDH13P55290 713 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 HERVK_113P63132 956 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 SGO1Q5FBB7 561 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 MRM1Q6IN84 353 aaKnown RBP14.19□□□□□ -0.14
TRIM28-203ENST00000593582 C16orf47Q6ZP98 133 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-203ENST00000593582 RPS27LQ71UM5 84 aaKnown RBP14.19□□□□□ -0.14
TRIM28-203ENST00000593582 PAGE2Q7Z2X7 111 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 MAMDC2Q7Z304 686 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-203ENST00000593582 GPALPP1Q8IXQ4 340 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 GSPT2Q8IYD1 628 aaKnown RBP14.19□□□□□ -0.14
TRIM28-203ENST00000593582 CPSF7Q8N684 471 aaKnown RBP14.19□□□□□ -0.14
TRIM28-203ENST00000593582 POGLUT1Q8NBL1 392 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 LRRN4CLQ8ND94 238 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 OR4F6Q8NGB9 312 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 RELTQ969Z4 430 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 ERVK-6Q9BXR3 956 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 TSPAN10Q9H1Z9 355 aaPredicted RBP14.19□□□□□ -0.14
TRIM28-203ENST00000593582 LIN28AQ9H9Z2 209 aaKnown RBP14.19□□□□□ -0.14
TRIM28-203ENST00000593582 TIMMDC1Q9NPL8 285 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 HPF1Q9NWY4 346 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 TMEM216Q9P0N5 145 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 TBK1Q9UHD2 729 aa14.19□□□□□ -0.14
TRIM28-203ENST00000593582 A0A1W2PR48 441 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 ARHGAP10A1A4S6 786 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 GLOD5A6NK44 160 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 NPIPA5E9PKD4 350 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 GOLGA8RI6L899 631 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 WWP2O00308 870 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 OR10H2O60403 315 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 SLC19A2O60779 497 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 PRKRAO75569 313 aaKnown RBP14.18□□□□□ -0.14
TRIM28-203ENST00000593582 GPR75O95800 540 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 GBAP04062 536 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 GSTA1P08263 222 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 ALOX15P16050 662 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-203ENST00000593582 TSPAN8P19075 237 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 RNF4P78317 190 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 LETMD1Q6P1Q0 360 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 MDGA2Q7Z553 956 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 SULF2Q8IWU5 870 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 ST13P4Q8IZP2 240 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-203ENST00000593582 ZNF321PQ8N8H1 164 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 MYRIPQ8NFW9 859 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 TRPC4APQ8TEL6 797 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 SREK1Q8WXA9 508 aaKnown RBP14.18□□□□□ -0.14
TRIM28-203ENST00000593582 PPWD1Q96BP3 646 aaKnown RBP14.18□□□□□ -0.14
TRIM28-203ENST00000593582 SENP5Q96HI0 755 aaPredicted RBP14.18□□□□□ -0.14
TRIM28-203ENST00000593582 MAGED4Q96JG8 741 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 ART5Q96L15 291 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 RASL10BQ96S79 203 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 PELOQ9BRX2 385 aaKnown RBP14.18□□□□□ -0.14
TRIM28-203ENST00000593582 EPB41L4BQ9H329 900 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.18□□□□□ -0.144e-8■■□□□ 14.4
TRIM28-203ENST00000593582 ADAM29Q9UKF5 820 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 NPIPA1Q9UND3 350 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 SNX6Q9UNH7 406 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 ICE1Q9Y2F5 2266 aa14.18□□□□□ -0.14
TRIM28-203ENST00000593582 MAST4O15021 2626 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 A0A1B0GTL3 188 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 PPP6CO00743 305 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 ASNA1O43681 348 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 PEX1O43933 1283 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 DLX3O60479 287 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 ZG16O60844 167 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 WISP2O76076 250 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 SUPT7LO94864 414 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 AIFM1O95831 613 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 CLDN1O95832 211 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 KLK1P06870 262 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 PYGBP11216 843 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 ATP5F1P24539 256 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-203ENST00000593582 HSD17B3P37058 310 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 SOX3P41225 446 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 CA7P43166 264 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 MEOX1P50221 254 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 HK2P52789 917 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 CLCQ05315 142 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 IL20RBQ6UXL0 311 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 SLC22A9Q8IVM8 553 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 SIAH3Q8IW03 269 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 ZNF721Q8TF20 911 aa14.17□□□□□ -0.14
TRIM28-203ENST00000593582 UBLCP1Q8WVY7 318 aaPredicted RBP14.17□□□□□ -0.14
TRIM28-203ENST00000593582 SELENOMQ8WWX9 145 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms