RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 KMOO15229 486 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 OXSR1O95747 527 aaPredicted RBP16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 ADAP00813 363 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 RHOP08100 348 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 GRSF1Q12849 480 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 PTGES3Q15185 160 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 RFLNAQ6ZTI6 216 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 IQCF1Q8N6M8 205 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 PHF11Q9UIL8 331 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 OMPP47874 163 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 CSNK1DP48730 415 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 ADAM15Q13444 863 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC27A4Q6P1M0 643 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 HDDC2Q7Z4H3 204 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 LRIG1Q96JA1 1093 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 CWH43Q9H720 699 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 KLHL42Q9P2K6 505 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 N6AMT1Q9Y5N5 214 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 HEBP2Q9Y5Z4 205 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 CHURC1-FNTBB4DL54 471 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC3A1Q07837 685 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 FRRS1Q6ZNA5 592 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 TCEAL8Q8IYN2 117 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 SIX5Q8N196 739 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 GGHQ92820 318 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 CARS2Q9HA77 564 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 LTB4R2Q9NPC1 389 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 IKZF2Q9UKS7 526 aa16.36■□□□□ 0.21
SMARCA4-215ENST00000590574 PEX11BO96011 259 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 GGTA1PQ4G0N0 100 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 FAM26DQ5JW98 314 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 DESI1Q6ICB0 168 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 SETD7Q8WTS6 366 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 MBOAT4Q96T53 435 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 CCDC32Q9BV29 185 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 SORBS1Q9BX66 1292 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 BEX2Q9BXY8 128 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 BTBD1Q9H0C5 482 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 ZNF334Q9HCZ1 680 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 ENTPD6O75354 484 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 C1SP09871 688 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 OSMP13725 252 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 RIPOR3Q96MK2 946 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 DMRT3Q9NQL9 472 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 BMP4P12644 408 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 ACVR2AP27037 513 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 CTSCP53634 463 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 DCDC1P59894 354 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 LHFPL3Q86UP9 236 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 OSTF1Q92882 214 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 AMBRA1Q9C0C7 1298 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 IFT52Q9Y366 437 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 CELP19835 753 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 SOX3P41225 446 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 CLK3P49761 638 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 PSMD4P55036 377 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 COMMD2Q86X83 199 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 ECHDC3Q96DC8 303 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 TRMT2BQ96GJ1 504 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 CERS4Q9HA82 394 aa16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 MRPS33Q9Y291 106 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-215ENST00000590574 J3KTA2 159 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 CA5AP35218 305 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 MAGEA8P43361 318 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 ERVK-21P61565 698 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 EIF4HQ15056 248 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 PDGFRLQ15198 375 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 NRSN1Q8IZ57 195 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 RSPH9Q9H1X1 276 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 GMFGO60234 142 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 IFI30P13284 250 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 PRMT2P55345 433 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 THOC7Q6I9Y2 204 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 C1QTNF3Q9BXJ4 246 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 TRIM36Q9NQ86 728 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 FAM172BPA6NC97 362 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC16A6O15403 523 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 KCNK5O95279 499 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 C6P13671 934 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 CTU2Q2VPK5 515 aaKnown RBP16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 ANKRD34AQ69YU3 496 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 KLK8O60259 260 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 NOS1APO75052 506 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC35F1Q5T1Q4 408 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC30A6Q6NXT4 461 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 LINGO2Q7L985 606 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 TMEM173Q86WV6 379 aaPredicted RBP16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 ZFP41Q8N8Y5 198 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 OR4E2Q8NGC2 313 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 ZNF563Q8TA94 476 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 MCHR1Q99705 422 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 LINC00597Q9H2U6 94 aa16.34■□□□□ 0.21
SMARCA4-215ENST00000590574 CLDN24A6NM45 220 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 J3QLW9 94 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 ZNF19P17023 458 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 RSPO2Q6UXX9 243 aaPredicted RBP16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 ERN2Q76MJ5 926 aaKnown RBP16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 VRK3Q8IV63 474 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 OR51G2Q8NGK0 314 aa16.33■□□□□ 0.21
SMARCA4-215ENST00000590574 SLC22A12Q96S37 553 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms