RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 PRR20AP86496 221 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 MC1RQ01726 317 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF234Q14588 700 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 TBCEQ15813 527 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 TRIM16LQ309B1 348 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SPDYE7PQ495Y7 208 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 IQCCQ4KMZ1 466 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF385BQ569K4 471 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 UBE2UQ5VVX9 321 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ADNP2Q6IQ32 1131 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CEACAM20Q6UY09 585 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 MMAAQ8IVH4 418 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF547Q8IVP9 402 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SLC44A2Q8IWA5 706 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 LRRC56Q8IYG6 542 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ENTHD1Q8IYW4 607 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SLC5A8Q8N695 610 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 AMER2Q8N7J2 671 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 OR5K2Q8NHB8 316 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 WDR48Q8TAF3 677 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 C9orf43Q8TAL5 461 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 UTP15Q8TED0 518 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 SLC38A4Q969I6 547 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 CIDECQ96AQ7 238 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ARRDC3Q96B67 414 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 RGMAQ96B86 450 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 YIPF6Q96EC8 236 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 WDR89Q96FK6 387 aaPredicted RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 Q96MT0 163 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 KCNC2Q96PR1 638 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 TEFMQ96QE5 360 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 NT5DC2Q9H857 520 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ZSCAN32Q9NX65 697 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ADAM29Q9UKF5 820 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 EXO1Q9UQ84 846 aaKnown RBP7.05□□□□□ -1.28
ZNF540-206ENST00000589117 HCFC2Q9Y5Z7 792 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 ENPP4Q9Y6X5 453 aa7.05□□□□□ -1.28
ZNF540-206ENST00000589117 MTCL1Q9Y4B5 1905 aaKnown RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 EFCAB10A6NFE3 127 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 EFCAB9A8MZ26 197 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 PRRT4C9JH25 899 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TMX2-CTNND1H3BSU7 103 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 KDM1AO60341 852 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 GUCY1B2O75343 617 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 GHRHP01286 108 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 CTSBP07858 339 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 ACVR2AP27037 513 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 PPP2R1BP30154 601 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 MAGEA8P43361 318 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 MAP2K4P45985 399 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 OR1E2P47887 323 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 MVDP53602 400 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 MEF2AQ02078 507 aaPredicted RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 GNA13Q14344 377 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TIMM50Q3ZCQ8 353 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 COLEC12Q5KU26 742 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 PERM1Q5SV97 790 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 METRNLQ641Q3 311 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 PNCKQ6P2M8 343 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 BHLHB9Q6PI77 547 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 DCDC5Q6ZRR9 648 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 FAM124AQ86V42 546 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 FAM129CQ86XR2 697 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 KRT73Q86Y46 540 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 OR52J3Q8NH60 311 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TANKQ92844 425 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 SMARCD2Q92925 531 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 NEURL3Q96EH8 262 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 PDXPQ96GD0 296 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 COX14Q96I36 57 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 COL21A1Q96P44 957 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 PSD2Q9BQI7 771 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 SPATA5L1Q9BVQ7 753 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 RAB11FIP5Q9BXF6 653 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TMEM245Q9H330 911 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 FBXO8Q9NRD0 319 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 CLN6Q9NWW5 311 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 GIN1Q9NXP7 522 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 OBP2AQ9NY56 170 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 PSORS1C1Q9UIG5 152 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 DUSP12Q9UNI6 340 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 RNF6Q9Y252 685 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 TRBC2A0A5B9 178 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 OR2A25A4D2G3 310 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 SLC22A31A6NKX4 558 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 C5orf67F2Z3F1 127 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 SOX1O00570 391 aaPredicted RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 AIREO43918 545 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 KCNJ13O60928 360 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 WBP4O75554 376 aaKnown RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 GCM2O75603 506 aaPredicted RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 OXSR1O95747 527 aaPredicted RBP7.04□□□□□ -1.28
ZNF540-206ENST00000589117 OPN1SWP03999 348 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 CDK1P06493 297 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 EPHX1P07099 455 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 ALOX5P09917 674 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 DRD2P14416 443 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 NR4A1P22736 598 aa7.04□□□□□ -1.28
ZNF540-206ENST00000589117 P2RY2P41231 377 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms