RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PPP2R2BQ00005 443 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 FRMPD2BQ6IN97 320 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 SHQ1Q6PI26 577 aaKnown RBP21.07■□□□□ 0.96
CIRBP-208ENST00000586548 ABHD13Q7L211 337 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 HORMAD2Q8N7B1 307 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 C1orf216Q8TAB5 229 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 SFXN5Q8TD22 340 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 LMX1AQ8TE12 382 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 LZICQ8WZA0 190 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 C7orf34Q96L11 122 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 UCK1Q9HA47 277 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 SEMA3GQ9NS98 782 aa21.07■□□□□ 0.96
CIRBP-208ENST00000586548 LOC105369274A0A096LPK9 316 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 LOC102723532A0A0G2JNH3 316 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 H0YGG7 62 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 hCG_2039718K7EN88 272 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 ZSCAN9O15535 394 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-208ENST00000586548 DPM1O60762 260 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 ALBP02768 609 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 CSNK2A2P19784 350 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-208ENST00000586548 MAGEA8P43361 318 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 CXCL12P48061 93 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 ITGA1P56199 1179 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 MAZP56270 477 aaKnown RBP21.06■□□□□ 0.96
CIRBP-208ENST00000586548 ARF3P61204 181 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-208ENST00000586548 ADARB1P78563 741 aaKnown RBP21.06■□□□□ 0.96
CIRBP-208ENST00000586548 CEBPEQ15744 281 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 MANEAQ5SRI9 462 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 REEP3Q6NUK4 255 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 DGLUCYQ7Z3D6 616 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 TMEM179BQ7Z7N9 219 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 PATL1Q86TB9 770 aaKnown RBP21.06■□□□□ 0.96
CIRBP-208ENST00000586548 OR4N4Q8N0Y3 316 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 ZCCHC10Q8TBK6 192 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 TAMM41Q96BW9 452 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 CNRIP1Q96F85 164 aaPredicted RBP21.06■□□□□ 0.96
CIRBP-208ENST00000586548 THUMPD1Q9NXG2 353 aaKnown RBP21.06■□□□□ 0.96
CIRBP-208ENST00000586548 DOLKQ9UPQ8 538 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 PADI2Q9Y2J8 665 aa21.06■□□□□ 0.96
CIRBP-208ENST00000586548 TRIOO75962 3097 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 C19orf67A6NJJ6 358 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 WASHC1A8K0Z3 465 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 BUD31P41223 144 aaPredicted RBP21.05■□□□□ 0.96
CIRBP-208ENST00000586548 NXPH1P58417 271 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 TNFRSF17Q02223 184 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 EPS8Q12929 822 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 TP53BP2Q13625 1128 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 SIM2Q14190 667 aaPredicted RBP21.05■□□□□ 0.96
CIRBP-208ENST00000586548 TNFAIP8L2Q6P589 184 aaPredicted RBP21.05■□□□□ 0.96
CIRBP-208ENST00000586548 KLHL35Q6PF15 583 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 SUN3Q8TAQ9 357 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 SLC35G5Q96KT7 338 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 GABARAPL1Q9H0R8 117 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 SEMA6CQ9H3T2 930 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 PRDM6Q9NQX0 595 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 VNN3Q9NY84 501 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 PSME2Q9UL46 239 aa21.05■□□□□ 0.96
CIRBP-208ENST00000586548 K7ESF4 209 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 B3GALT2O43825 422 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 SH3BP5O60239 455 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 GNAO1P09471 354 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 SMIM18P0DKX4 95 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 TYRP1P17643 537 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 HNRNPKP61978 463 aaKnown RBP eCLIP21.04■□□□□ 0.968e-8■□□□□ 10.2
CIRBP-208ENST00000586548 PPP1CAP62136 330 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 RPS26P62854 115 aaKnown RBP21.04■□□□□ 0.96
CIRBP-208ENST00000586548 IQCCQ4KMZ1 466 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 IFI44LQ53G44 452 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 USP51Q70EK9 711 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 HS3ST5Q8IZT8 346 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 SDR16C5Q8N3Y7 309 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 ARL14Q8N4G2 192 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 MOAP1Q96BY2 351 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 PRDM9Q9NQV7 894 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 EML5Q05BV3 1969 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 LILRA5A6NI73 299 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 C5orf58C9J3I9 102 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 M0QX08 132 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 PRAMEF10O60809 474 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 OPN1SWP03999 348 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 ALOX12P18054 663 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 BCKDHBP21953 392 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 DNAJA1P31689 397 aaKnown RBP21.04■□□□□ 0.96
CIRBP-208ENST00000586548 MPIP34949 423 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 DEFB134Q4QY38 66 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 BHLHB9Q6PI77 547 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 KLHL6Q8WZ60 621 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 NRBF2Q96F24 287 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 FBXL20Q96IG2 436 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 IER2Q9BTL4 223 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 SMURF2Q9HAU4 748 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 ZCCHC3Q9NUD5 404 aaKnown RBP21.04■□□□□ 0.96
CIRBP-208ENST00000586548 KCMF1Q9P0J7 381 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 SIT1Q9Y3P8 196 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 ZNF780BQ9Y6R6 833 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 U3KQV3 271 aa21.04■□□□□ 0.96
CIRBP-208ENST00000586548 HMGN4O00479 90 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 UBXN7O94888 489 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 FPR1P21462 350 aa21.03■□□□□ 0.96
CIRBP-208ENST00000586548 CPN2P22792 545 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms