RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 UBFD1O14562 309 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 AZIN1O14977 448 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 RGS14O43566 566 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 TMPRSS11DO60235 418 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 SH3BGRLO75368 114 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 EEDO75530 441 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 MYO1DO94832 1006 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 GPR75O95800 540 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 IFNA16P05015 189 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 DHRS4L1P0CG22 281 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 DRD2P14416 443 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 ALOX15P16050 662 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 DDX5P17844 614 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 NR1D1P20393 614 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 GRK2P25098 689 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 TPP2P29144 1249 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 SERPINB4P48594 390 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 ARG2P78540 354 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 HEPACAMQ14CZ8 416 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 TCHHL1Q5QJ38 904 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 C6orf163Q5TEZ5 329 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 PRICKLE2Q7Z3G6 844 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 CUZD1Q86UP6 607 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 PTRH1Q86Y79 214 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 CLYBLQ8N0X4 340 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 APCDD1LQ8NCL9 501 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 NFAM1Q8NET5 270 aaPredicted RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 RBM18Q96H35 190 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 ATP6V1G3Q96LB4 118 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 KCNA7Q96RP8 456 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 MRPL1Q9BYD6 325 aaKnown RBP12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 ACPTQ9BZG2 426 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 EHD3Q9NZN3 535 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 PTGFRNQ9P2B2 879 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 TMED5Q9Y3A6 229 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
PRKCSH-202ENST00000585540 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 IGHV3-20A0A0C4DH32 117 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 WDR91A4D1P6 747 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 OR5H15A6NDH6 313 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 TMEM114B3SHH9 223 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 K7EM74 188 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 ZFAND5O76080 213 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 AIFM1O95831 613 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 KLK1P06870 262 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 SLC35E2P0CK97 266 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 PIK3R1P27986 724 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 TIA1P31483 386 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 HNRNPFP52597 415 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 FOXA1P55317 472 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 FOLH1Q04609 750 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 RAPSNQ13702 412 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 ZNF169Q14929 603 aaPredicted RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 SGO1Q5FBB7 561 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 NDUFAF5Q5TEU4 345 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 IKBIPQ70UQ0 350 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 NUDCD3Q8IVD9 361 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 GPALPP1Q8IXQ4 340 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 C1orf52Q8N6N3 182 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 SIRT6Q8N6T7 355 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 TMEM52Q8NDY8 209 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 OR5L2Q8NGL0 311 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 OR1N1Q8NGS0 311 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 PPP1R14CQ8TAE6 165 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 DNAJB14Q8TBM8 379 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 MGARPQ8TDB4 240 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 ANKRD9Q96BM1 317 aaPredicted RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 C11orf24Q96F05 449 aaPredicted RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 SORBS1Q9BX66 1292 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 DEFB126Q9BYW3 111 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 TNFRSF12AQ9NP84 129 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 PNO1Q9NRX1 252 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 FARSBQ9NSD9 589 aaKnown RBP12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 PCDHA9Q9Y5H5 950 aa12.9□□□□□ -0.34
PRKCSH-202ENST00000585540 ATMQ13315 3056 aa12.9□□□□□ -0.35
PRKCSH-202ENST00000585540 A0A1W2PR48 441 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 OR6C76A6NM76 312 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 C17orf105B2RV13 164 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 J3QKU1 62 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 PCDH7O60245 1069 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 FGF17O60258 216 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 LDB3O75112 727 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 SLITRK5O94991 958 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 SERPINE1P05121 402 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 CHRNGP07510 517 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 TNNI3P19429 210 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 ARRB2P32121 409 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 HTR6P50406 440 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 GPR143P51810 404 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 WDR4P57081 412 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 ZNF763Q0D2J5 394 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 ACER2Q5QJU3 275 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 CES4AQ5XG92 561 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 KANK2Q63ZY3 851 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 TRIM42Q8IWZ5 723 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 DND1Q8IYX4 353 aaKnown RBP12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 GOLGA6L1Q8N7Z2 621 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 OR4K14Q8NGD5 310 aa12.89□□□□□ -0.35
PRKCSH-202ENST00000585540 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms