RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 VTI1BQ9UEU0 232 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 NDRG3Q9UGV2 375 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 TESMINQ9Y4I5 508 aa12.94□□□□□ -0.34
CSNK1D-224ENST00000584672 USF3Q68DE3 2245 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 HRKO00198 91 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 AP3B1O00203 1094 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 EIF3FO00303 357 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 CYR61O00622 381 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 IL18BPO95998 194 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 SLCO1A2P46721 670 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 LIM2P55344 173 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 TIAL1Q01085 375 aaKnown RBP eCLIP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 TNK1Q13470 666 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 EIPR1Q53HC9 387 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 SEL1L2Q5TEA6 688 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 NXPE4Q6UWF7 544 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 TMEM64Q6YI46 380 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 SYDE1Q6ZW31 735 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 THOC6Q86W42 341 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 GABPB2Q8TAK5 448 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 ZNF721Q8TF20 911 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 SLC44A1Q8WWI5 657 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 MS4A6EQ96DS6 147 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 WDYHV1Q96HA8 205 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 CALR3Q96L12 384 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 QRFPRQ96P65 431 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 GAL3ST4Q96RP7 486 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 SECISBP2Q96T21 854 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 NPLQ9BXD5 320 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 TSGA10Q9BZW7 698 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 PELI2Q9HAT8 420 aa12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 C20orf96Q9NUD7 363 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 CHCHD2Q9Y6H1 151 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 RAI1Q7Z5J4 1906 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-224ENST00000584672 A0A087X1B8 175 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 HAX1O00165 279 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 CTIFO43310 598 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 CTNSO60931 367 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 IFNA2P01563 188 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 SF3B4Q15427 424 aaKnown RBP eCLIP12.92□□□□□ -0.341e-8■■■■■ 27.6
CSNK1D-224ENST00000584672 MPEG1Q2M385 716 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 WIPI1Q5MNZ9 446 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 RBM20Q5T481 1227 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 VASNQ6EMK4 673 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 LRRC8EQ6NSJ5 796 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 GSTA5Q7RTV2 222 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 DIO2Q92813 273 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 INTS12Q96CB8 462 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 FBXL8Q96CD0 374 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 WFIKKN1Q96NZ8 548 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 GSX2Q9BZM3 304 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 COPS7BQ9H9Q2 264 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 CNIH4Q9P003 139 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 FBXO5Q9UKT4 447 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 CNOT11Q9UKZ1 510 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 COMMD10Q9Y6G5 202 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 MED12LQ86YW9 2145 aa12.92□□□□□ -0.34
CSNK1D-224ENST00000584672 CR1P17927 2039 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 LRIT2A6NDA9 550 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 PHF1O43189 567 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 C1QAP02745 245 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 MSH2P43246 934 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 MASP1P48740 699 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 VPS41P49754 854 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 CDK9P50750 372 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 CDKN2DP55273 166 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 RCAN2Q14206 197 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 SLBPQ14493 270 aaKnown RBP eCLIP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 TRIP13Q15645 432 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 BBS9Q3SYG4 887 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 ADNP2Q6IQ32 1131 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 OR4N5Q8IXE1 308 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 ZNF441Q8N8Z8 693 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 PPWD1Q96BP3 646 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 ZC3HAV1LQ96H79 300 aaKnown RBP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 SENP5Q96HI0 755 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 GNRHR2Q96P88 292 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 FRMD8P1Q9BZ68 369 aaPredicted RBP12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 IKZF3Q9UKT9 509 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 DAPP1Q9UN19 280 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 SLC22A14Q9Y267 594 aa12.91□□□□□ -0.34
CSNK1D-224ENST00000584672 ROS1P08922 2347 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 ZCWPW2A0A1B0GU75 182 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 IPO7O95373 1038 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 F12P00748 615 aaPredicted RBP12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 CYP4B1P13584 511 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 TPSB2P20231 275 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 KCNJ1P48048 391 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 SRYQ05066 204 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 FAM27E3Q08E93 113 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 TPSAB1Q15661 275 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 ANKRD22Q5VYY1 191 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 HEPHL1Q6MZM0 1159 aa12.9□□□□□ -0.34
CSNK1D-224ENST00000584672 DGAT2L6Q6ZPD8 337 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms