RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 A0A0G2JND7 137 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SMIM31A0A1B0GVY4 71 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 A0A1W2PPI3 338 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 DUXAA6NLW8 204 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 A8MXE2 369 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF487B1APH4 448 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM90A26D6RGX4 464 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 F8VP50 259 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SPECC1L-ADORA2AF8WAN1 911 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SGK1O00141 431 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 CTDSP2O14595 271 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 CASQ2O14958 399 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ANKRD28O15084 1053 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 CHADO15335 359 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 DENRO43583 198 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SNNO75324 88 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 CIB2O75838 187 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 TOMM70O94826 608 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 BPGMP07738 259 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SERPINA6P08185 405 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 KRT7P08729 469 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 MYL2P10916 166 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 UQCRBP14927 111 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 STMN1P16949 149 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF23P17027 643 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 GLRA2P23416 452 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ACAT1P24752 427 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PRDX6P30041 224 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PEX19P40855 299 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 HNF4AP41235 474 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SERPINB9P50453 376 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF41P51814 821 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 YWHAEP62258 255 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 IRX4P78413 519 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 OGDHQ02218 1023 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC25A11Q02978 314 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ASPHQ12797 758 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 TCP10Q12799 353 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 GRIK2Q13002 908 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 AIMP2Q13155 320 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 KIR2DS3Q14952 304 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 HADHQ16836 314 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 MYLK3Q32MK0 819 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 CNPY1Q3B7I2 92 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 LIN52Q52LA3 116 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 KRTCAP3Q53RY4 240 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 RAB41Q5JT25 222 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 C6orf163Q5TEZ5 329 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ANKRD22Q5VYY1 191 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 METTL21CQ5VZV1 264 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SUSD1Q6UWL2 747 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PET117Q6UWS5 81 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PLEKHM3Q6ZWE6 761 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ARCQ7LC44 396 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ARHGAP22Q7Z5H3 698 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PHLDB2Q86SQ0 1253 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 UNC45BQ8IWX7 931 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SCYL3Q8IZE3 742 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 POC5Q8NA72 575 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 POGLUT1Q8NBL1 392 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 TMEM116Q8NCL8 245 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 FBXO36Q8NEA4 188 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 APPL2Q8NEU8 664 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 OR6J1Q8NGC5 347 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 GSDMBQ8TAX9 411 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ACER1Q8TDN7 264 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ACMSDQ8TDX5 336 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM172AQ8WUF8 416 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 STMN2Q93045 179 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 IGSF8Q969P0 613 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM149B1Q96BN6 582 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PPP1R14BQ96C90 147 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 DGCR14Q96DF8 476 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SAT2Q96F10 170 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PGAP3Q96FM1 320 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SERAC1Q96JX3 654 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PRMT6Q96LA8 375 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 OLFM3Q96PB7 478 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 BTBD9Q96Q07 612 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PANX3Q96QZ0 392 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 TAAR1Q96RJ0 339 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ABHD1Q96SE0 405 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 C11orf70Q9BRQ4 267 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM213AQ9BRX8 229 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 TMEM121Q9BTD3 319 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 PI4K2AQ9BTU6 479 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 TRIM4Q9C037 500 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 WWP1Q9H0M0 922 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 WDR13Q9H1Z4 485 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 C2orf40Q9H1Z8 148 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM124BQ9H5Z6 455 aaPredicted RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 APOBEC3GQ9HC16 384 aaKnown RBP3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 FGF22Q9HCT0 170 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 TRPC7Q9HCX4 862 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 S100A14Q9HCY8 104 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 KLHL9Q9P2J3 617 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ITGA11Q9UKX5 1188 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 SESN1Q9Y6P5 492 aa3.66□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF541Q9H0D2 1346 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms