RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PELOQ9BRX2 385 aaKnown RBP9.78□□□□□ -0.84
CCDC47-203ENST00000580986 EBPLQ9BY08 206 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 VN1R1Q9GZP7 353 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 ACTL8Q9H568 366 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 RABEP2Q9H5N1 569 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 ZNF385DQ9H6B1 395 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 REEP4Q9H6H4 257 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 ATP6V1HQ9UI12 483 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 FBXW2Q9UKT8 454 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 CLDN16Q9Y5I7 305 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 CEP295Q9C0D2 2601 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 LOC102723996A0A087X1L8 192 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 LOC101059948A0A1B0GTJ6 334 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 TCRBV16S1A1N1A0A5B0 115 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 MED19A0JLT2 244 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-203ENST00000580986 DYTNA2CJ06 578 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 SCAMP2O15127 329 aaKnown RBP9.77□□□□□ -0.85
CCDC47-203ENST00000580986 DNAJB6O75190 326 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 SLITRK5O94991 958 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 GPR75O95800 540 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 MMP11P24347 488 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 DLSTP36957 453 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 FOLR3P41439 243 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 FRKP42685 505 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-203ENST00000580986 STX1BP61266 288 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 MC1RQ01726 317 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 LRRC74AQ0VAA2 488 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 SQLEQ14534 574 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 PTGR1Q14914 329 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 MLIPQ5VWP3 458 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 C18orf63Q68DL7 685 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 CPSF7Q8N684 471 aaKnown RBP9.77□□□□□ -0.85
CCDC47-203ENST00000580986 FAM47BQ8NA70 645 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 OR8J2Q8NGG1 315 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 TSPEARQ8WU66 669 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 KCNE4Q8WWG9 221 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 COQ8BQ96D53 544 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 EGLN2Q96KS0 407 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 RILPQ96NA2 401 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 TSSK3Q96PN8 268 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 CCT8L2Q96SF2 557 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 PRPF18Q99633 342 aaKnown RBP9.77□□□□□ -0.85
CCDC47-203ENST00000580986 C1orf50Q9BV19 199 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 CLMPQ9H6B4 373 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 GPN2Q9H9Y4 310 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-203ENST00000580986 MIEF1Q9NQG6 463 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 PRTFDC1Q9NRG1 225 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 ATAD3AQ9NVI7 634 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 C19orf25Q9UFG5 118 aaPredicted RBP9.77□□□□□ -0.85
CCDC47-203ENST00000580986 GIMAP2Q9UG22 337 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 MKL2Q9ULH7 1088 aa9.77□□□□□ -0.85
CCDC47-203ENST00000580986 EXO1Q9UQ84 846 aaKnown RBP9.77□□□□□ -0.85
CCDC47-203ENST00000580986 E9PBE3 544 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 TLX3O43711 291 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 KLHL41O60662 606 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 CCDC22O60826 627 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ALOX12BO75342 701 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ATP1B1P05026 303 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 UMODP07911 640 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 SLC35E2P0CK97 266 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 F8A1P23610 371 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 EIF2S3P41091 472 aaKnown RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 HNRNPFP52597 415 aaKnown RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 EMP2P54851 167 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 PLIN5Q00G26 463 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 FOLH1Q04609 750 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 SRSF11Q05519 484 aaKnown RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ACTN3Q08043 901 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 C2orf80Q0P641 193 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 RCAN2Q14206 197 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 MLC1Q15049 377 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 RPS6KA2Q15349 733 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 MINDY4Q4G0A6 757 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 GKAP1Q5VSY0 366 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 TMEM198Q66K66 360 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 UNQ6494/PRO21346Q6UXR6 183 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 MSANTD1Q6ZTZ1 278 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ST13P4Q8IZP2 240 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 MIER2Q8N344 545 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 TMEM52Q8NDY8 209 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 OR4K14Q8NGD5 310 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ADAMTS17Q8TE56 1095 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 METTL21AQ8WXB1 218 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ANKRD9Q96BM1 317 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 PPCDCQ96CD2 204 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ERP27Q96DN0 273 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ZNF681Q96N22 645 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ELAC2Q9BQ52 826 aaKnown RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 CRB3Q9BUF7 120 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 YIPF2Q9BWQ6 316 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 DPY30Q9C005 99 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 BHLHE41Q9C0J9 482 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 SLC35C2Q9NQQ7 365 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ACSS1Q9NUB1 689 aaPredicted RBP9.76□□□□□ -0.85
CCDC47-203ENST00000580986 GIMAP4Q9NUV9 329 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 HEY2Q9UBP5 337 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 BAIAP2L1Q9UHR4 511 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 C3orf18Q9UK00 162 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 ARL2BPQ9Y2Y0 163 aa9.76□□□□□ -0.85
CCDC47-203ENST00000580986 PTRH2Q9Y3E5 179 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms