RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 NRDCO43847 1150 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 AVILO75366 819 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 NDUFS3O75489 264 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 TRAPPC6AO75865 159 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 STK10O94804 968 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 SERPIND1P05546 499 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 SOD3P08294 240 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 NPPBP16860 134 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CHRM3P20309 590 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 UGT2B10P36537 528 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CDKN1AP38936 164 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CLCN7P51798 805 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 DIO3P55073 304 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 GDF10P55107 478 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 HSD17B7P56937 341 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 RPS4XP62701 263 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 SKP1P63208 163 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 ZBED6P86452 979 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CDH17Q12864 832 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 MPEG1Q2M385 716 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 FREM1Q5H8C1 2179 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 NIPAL1Q6NVV3 410 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 VWA1Q6PCB0 445 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 MBOAT1Q6ZNC8 495 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CLEC17AQ6ZS10 378 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CLNKQ7Z7G1 428 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 C17orf64Q86WR6 236 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 TMEM132CQ8N3T6 1108 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 TC2NQ8N9U0 490 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 MORN4Q8NDC4 146 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 ABHD11Q8NFV4 315 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF721Q8TF20 911 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 GTPBP3Q969Y2 492 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 STARD4Q96DR4 205 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 SPACA9Q96E40 222 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 UCN2Q96RP3 112 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 TMEM204Q9BSN7 226 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 OR8D2Q9GZM6 311 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 SHARPINQ9H0F6 387 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CHRAC1Q9NRG0 131 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CLCF1Q9UBD9 225 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 ANAPC5Q9UJX4 755 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 CAPN11Q9UMQ6 739 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 ZNF148Q9UQR1 794 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 IKBKGQ9Y6K9 419 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 TRRAPQ9Y4A5 3859 aa6.97□□□□□ -1.29
SMARCE1-217ENST00000580654 PRR14LQ5THK1 2151 aa6.96□□□□□ -1.29
SMARCE1-217ENST00000580654 IGHV4-30-2A0A087WSY4 118 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 TRBC2A0A5B9 178 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 MACROD2A1Z1Q3 448 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 FRG2CA6NGY1 282 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 SHISA8B8ZZ34 492 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 PJA2O43164 708 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 ETHE1O95571 254 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 DANCRP0C864 163 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CYP4B1P13584 511 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 SRD5A1P18405 259 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 IGFBP5P24593 272 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 ARNTP27540 789 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 GRK3P35626 688 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 SCTRP47872 440 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 MTTPP55157 894 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CASP9P55211 416 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CCZ1BP86790 482 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CCZ1P86791 482 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 VLDLRP98155 873 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 RGS1Q08116 209 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 SLC13A2Q13183 592 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CUL1Q13616 776 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 RCAN2Q14206 197 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 ANKRD34AQ69YU3 496 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 BICRALQ6AI39 1079 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 LCTLQ6UWM7 567 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 C12orf54Q6X4T0 127 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 STRA8Q7Z7C7 330 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 RHOT2Q8IXI1 618 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 C9orf40Q8IXQ3 194 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 PRELID2Q8N945 189 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 ANKRD53Q8N9V6 530 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 FAM71DQ8N9W8 422 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 LILRB1Q8NHL6 650 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 SLC2A12Q8TD20 617 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 PEX13Q92968 403 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 ABTB1Q969K4 478 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 ZNF597Q96LX8 424 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 GNRHR2Q96P88 292 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 FAM111AQ96PZ2 611 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 OR4K3Q96R72 315 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CSF3RQ99062 836 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 TM9SF2Q99805 663 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 DOHHQ9BU89 302 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 OPN3Q9H1Y3 402 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 TREX1Q9NSU2 369 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 ANO10Q9NW15 660 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CNIH4Q9P003 139 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 VTI1BQ9UEU0 232 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 ZFP69BQ9UJL9 534 aa6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 GDF2Q9UK05 429 aaPredicted RBP6.96□□□□□ -1.3
SMARCE1-217ENST00000580654 CRYL1Q9Y2S2 319 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms