RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ZNF295-AS1Q8N0V1 137 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 MREGQ8N565 214 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 ACOT4Q8N9L9 421 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 OR4F6Q8NGB9 312 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 WDR20Q8TBZ3 569 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 TRPC4APQ8TEL6 797 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 MTFMTQ96DP5 389 aaKnown RBP14.96□□□□□ -0.01
VAPA-204ENST00000577901 FRG2BQ96QU4 278 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 SERPINI1Q99574 410 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 HES7Q9BYE0 225 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 ELOVL6Q9H5J4 265 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 LYRM4Q9HD34 91 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 PRTFDC1Q9NRG1 225 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 RAB21Q9UL25 225 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 STK38LQ9Y2H1 464 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 ZNF835Q9Y2P0 537 aa14.96□□□□□ -0.01
VAPA-204ENST00000577901 NPIPA5E9PKD4 350 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 RTCAO00442 366 aaKnown RBP14.95□□□□□ -0.02
VAPA-204ENST00000577901 CD46P15529 392 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 MAOAP21397 527 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 ST13P50502 369 aaKnown RBP14.95□□□□□ -0.02
VAPA-204ENST00000577901 NAA20P61599 178 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 TRAF3Q13114 568 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 SLC13A2Q13183 592 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 SLAMF1Q13291 335 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 UNC50Q53HI1 259 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 SPINK14Q6IE38 97 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 PAPD4Q6PIY7 484 aaKnown RBP14.95□□□□□ -0.02
VAPA-204ENST00000577901 Q6ZPB1 254 aaPredicted RBP14.95□□□□□ -0.02
VAPA-204ENST00000577901 RNF175Q8N4F7 328 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 CCDC63Q8NA47 563 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 C7orf57Q8NEG2 295 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 MYRIPQ8NFW9 859 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 RDH11Q8TC12 318 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 M1APQ8TC57 530 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 TSLPQ969D9 159 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 L3HYPDHQ96EM0 354 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 SCMH1Q96GD3 660 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 TMEM237Q96Q45 408 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 NPAS2Q99743 824 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 IQCGQ9H095 443 aaKnown RBP14.95□□□□□ -0.02
VAPA-204ENST00000577901 TSPAN10Q9H1Z9 355 aaPredicted RBP14.95□□□□□ -0.02
VAPA-204ENST00000577901 MMP25Q9NPA2 562 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 ITGB1BP2Q9UKP3 347 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 PPT2Q9UMR5 302 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 NPIPA1Q9UND3 350 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 SNX6Q9UNH7 406 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 MEMO1Q9Y316 297 aa14.95□□□□□ -0.02
VAPA-204ENST00000577901 ASPDHA6ND91 283 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 SYNDIG1LA6NDD5 238 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 C19orf84I3L1E1 186 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 MAN1A2O60476 641 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 SCELO95171 688 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 PROCP04070 461 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 TSPAN8P19075 237 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 OC90Q02509 493 aaPredicted RBP14.94□□□□□ -0.02
VAPA-204ENST00000577901 SLC18A2Q05940 514 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 CDSNQ15517 529 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 ZYG11AQ6WRX3 759 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 ZNF793Q6ZN11 406 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 RPS27LQ71UM5 84 aaKnown RBP14.94□□□□□ -0.02
VAPA-204ENST00000577901 C4orf33Q8N1A6 199 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 SLC5A8Q8N695 610 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 FAM47BQ8NA70 645 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 TMEM178AQ8NBL3 297 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 FRMD6Q96NE9 622 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 NECTIN3Q9NQS3 549 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 MS4A12Q9NXJ0 267 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 AHSPQ9NZD4 102 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 KCMF1Q9P0J7 381 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 TRPS1Q9UHF7 1281 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 MID2Q9UJV3 735 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 EMCNQ9ULC0 261 aa14.94□□□□□ -0.02
VAPA-204ENST00000577901 IGKV3D-11A0A0A0MRZ8 115 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 TCRBV16S1A1N1A0A5B0 115 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 GABRR3A8MPY1 467 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 G3V2L1 256 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 CYR61O00622 381 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 PPP6CO00743 305 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 PLPP1O14494 284 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 PLIN3O60664 434 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 CTNSO60931 367 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 CLDN14O95500 239 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 SP1P08047 785 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 CPA3P15088 417 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 CPN2P22792 545 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 SSTR2P30874 369 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 TLX1P31314 330 aaPredicted RBP14.93□□□□□ -0.02
VAPA-204ENST00000577901 SGO1Q5FBB7 561 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 LETMD1Q6P1Q0 360 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 GPRIN3Q6ZVF9 776 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 SCUBE1Q8IWY4 988 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 ZCCHC7Q8N3Z6 543 aaKnown RBP14.93□□□□□ -0.02
VAPA-204ENST00000577901 HORMAD2Q8N7B1 307 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 SELENOMQ8WWX9 145 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 ZNF382Q96SR6 550 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 MAPKAP1Q9BPZ7 522 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 TMEM109Q9BVC6 243 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 NMRK1Q9NWW6 199 aa14.93□□□□□ -0.02
VAPA-204ENST00000577901 LGALS13Q9UHV8 139 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms