RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ANKMY1Q9P2S6 941 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 SLC23A2Q9UGH3 650 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 KIF26AQ9ULI4 1882 aaPredicted RBP8.5□□□□□ -1.05
NCBP3-204ENST00000574911 TLR4O00206 839 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 TBX1O43435 398 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 HSMCR30P0CW71 290 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 CXCR2P25025 360 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 ELAVL4P26378 380 aaKnown RBP8.5□□□□□ -1.05
NCBP3-204ENST00000574911 OPRD1P41143 372 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 ETV6P41212 452 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 EIF2B2P49770 351 aaKnown RBP8.5□□□□□ -1.05
NCBP3-204ENST00000574911 ILKQ13418 452 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 ELAVL3Q14576 367 aaKnown RBP8.5□□□□□ -1.05
NCBP3-204ENST00000574911 HEPACAMQ14CZ8 416 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 TSTQ16762 297 aaKnown RBP8.5□□□□□ -1.05
NCBP3-204ENST00000574911 GAB4Q2WGN9 574 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 LEXMQ3ZCV2 418 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 SLX4IPQ5VYV7 408 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 STEAP3Q658P3 488 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 TCTN3Q6NUS6 607 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 ADAMTSL4Q6UY14 1074 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 FAM92BQ6ZTR7 304 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 AMZ2Q86W34 360 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 PARP16Q8N5Y8 322 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 SPPL3Q8TCT6 385 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 TFGQ92734 400 aaPredicted RBP8.5□□□□□ -1.05
NCBP3-204ENST00000574911 ZNF764Q96H86 408 aaPredicted RBP8.5□□□□□ -1.05
NCBP3-204ENST00000574911 Q96MT0 163 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 MGLLQ99685 303 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 FUZQ9BT04 418 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 MENTQ9BUN1 341 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 NEUROD4Q9HD90 331 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 IL23AQ9NPF7 189 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 TAC3Q9UHF0 121 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 TMCC3Q9ULS5 477 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 MGAT4BQ9UQ53 548 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 INSL6Q9Y581 213 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 PEX16Q9Y5Y5 336 aa8.5□□□□□ -1.05
NCBP3-204ENST00000574911 HMGN4O00479 90 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 FAAHO00519 579 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 ENTPD6O75354 484 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 PDE9AO76083 593 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 POU1F1P28069 291 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 SERPINB1P30740 379 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 BMPR1AP36894 532 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 HSD17B2P37059 387 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 KCNJ5P48544 419 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 CCR8P51685 355 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 SSX1Q16384 188 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 TMEM201Q5SNT2 666 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 C12orf73Q69YU5 71 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 CYP4Z2PQ8N1L4 340 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 FAM83FQ8NEG4 500 aaPredicted RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 OR4D11Q8NGI4 311 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 OR5K2Q8NHB8 316 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 CXorf40AQ8TE69 158 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 SMPDL3AQ92484 453 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 ZNF354BQ96LW1 612 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 QRFPRQ96P65 431 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 A0A1W2PPV9 198 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 CCRL2O00421 344 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 ARHGAP33O14559 1287 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 KIAA0513O60268 411 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 IGFBP1P08833 259 aaPredicted RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 DDX5P17844 614 aaKnown RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 S100A5P33763 92 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 CTNNB1P35222 781 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 GSTM5P46439 218 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 RHAGQ02094 409 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 CNTN1Q12860 1018 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 FOXD4Q12950 439 aaPredicted RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 SLC13A2Q13183 592 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 MED22Q15528 200 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 DCST1Q5T197 706 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 MEDAGQ5VYS4 303 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 UBE3DQ7Z6J8 389 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 RBM45Q8IUH3 476 aaKnown RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 WDR36Q8NI36 951 aaKnown RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 SP7Q8TDD2 431 aaPredicted RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 HPS1Q92902 700 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 RAB8BQ92930 207 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 ZNF707Q96C28 371 aaPredicted RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 OPALINQ96PE5 141 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 TMEM245Q9H330 911 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 SERHL2Q9H4I8 314 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 C11orf16Q9NQ32 467 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 ZNF229Q9UJW7 825 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 ACAD8Q9UKU7 415 aa8.49□□□□□ -1.05
NCBP3-204ENST00000574911 LSM2Q9Y333 95 aaKnown RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 MRPS23Q9Y3D9 190 aaKnown RBP8.49□□□□□ -1.05
NCBP3-204ENST00000574911 FEZF1A0PJY2 475 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 PRAMEF27A3QJZ7 478 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 ANHXE9PGG2 379 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 HAT1O14929 419 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 TMPRSS11DO60235 418 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 KDM1AO60341 852 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 GPX5O75715 221 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 SLITRK5O94991 958 aa8.48□□□□□ -1.05
NCBP3-204ENST00000574911 H1F0P07305 194 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms