RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 PCDH1Q08174 1060 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 SETDB1Q15047 1291 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 TMEM211Q6ICI0 200 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 OPN5Q6U736 354 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 GPR180Q86V85 440 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 SLC22A16Q86VW1 577 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 ZNF295-AS1Q8N0V1 137 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 MARVELD2Q8N4S9 558 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 RHEBL1Q8TAI7 183 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 ZNF721Q8TF20 911 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 PPWD1Q96BP3 646 aaKnown RBP19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 SENP5Q96HI0 755 aaPredicted RBP19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 FAM173AQ9BQD7 235 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 TTTY12Q9BZ98 90 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 TP63Q9H3D4 680 aaPredicted RBP19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 RPF2Q9H7B2 306 aaKnown RBP19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 PLSCR2Q9NRY7 297 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 MS4A12Q9NXJ0 267 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 PHF11Q9UIL8 331 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 HRH3Q9Y5N1 445 aa19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.57■□□□□ 0.72
CHRNB1-206ENST00000574054 LRRC14BA6NHZ5 514 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 NPIPA2E9PIF3 369 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 NPIPA3F8WFD2 350 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 PLPP1O14494 284 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 CNR1P21554 472 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 SSTR2P30874 369 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 PIK3CBP42338 1070 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 RPS13P62277 151 aaKnown RBP19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 PHEXP78562 749 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 PLIN5Q00G26 463 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 GUCY2DQ02846 1103 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 FOLH1Q04609 750 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 ASPHQ12797 758 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 KLC3Q6P597 504 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 RGS9BPQ6ZS82 235 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 FAM47EQ6ZV65 393 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 CCDC91Q7Z6B0 441 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 C7orf57Q8NEG2 295 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 DOK4Q8TEW6 326 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 RBM18Q96H35 190 aaKnown RBP19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 SGCZQ96LD1 299 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 ZDHHC11Q9H8X9 412 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 SACM1LQ9NTJ5 587 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 CPSF2Q9P2I0 782 aaKnown RBP19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 ATG4BQ9Y4P1 393 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 PCDHGA11Q9Y5H2 935 aa19.56■□□□□ 0.72
CHRNB1-206ENST00000574054 DNAJC13O75165 2243 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 A0A096LPK6 155 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 ZNF354AO60765 605 aaPredicted RBP19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 PRKRAO75569 313 aaKnown RBP19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 P04436 131 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 ALDH18A1P54886 795 aaKnown RBP19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 IGLV3-21P80748 117 aaPredicted RBP19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 TNFRSF17Q02223 184 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 ACAP2Q15057 778 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 LIPJQ5W064 366 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 C18orf63Q68DL7 685 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 C8orf74Q6P047 294 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 MEX3BQ6ZN04 569 aaKnown RBP19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 ZNF572Q7Z3I7 529 aaPredicted RBP19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 GOLM1Q8NBJ4 401 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 TANKQ92844 425 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 CNPPD1Q9BV87 410 aa19.55■□□□□ 0.72
CHRNB1-206ENST00000574054 HMX2A2RU54 273 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 HRKO00198 91 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 EEDO75530 441 aaKnown RBP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 GLSO94925 669 aaPredicted RBP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 CCL3P10147 92 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 ALOX15P16050 662 aaPredicted RBP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 PTX3P26022 381 aaPredicted RBP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 TYK2P29597 1187 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 ARL1P40616 181 aaPredicted RBP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 BUD31P41223 144 aaPredicted RBP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 DNASE1L1P49184 302 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 SERPINB8P50452 374 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 HNRNPH2P55795 449 aaKnown RBP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 CKAP4Q07065 602 aaKnown RBP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 GTF2H2Q13888 395 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 CPSF6Q16630 551 aaKnown RBP eCLIP19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 PIGGQ5H8A4 983 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 EMC4Q5J8M3 183 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 NDUFAF5Q5TEU4 345 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 GTF2H2CQ6P1K8 395 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 DGAT2L6Q6ZPD8 337 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 GOLGA7Q7Z5G4 137 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 C9orf40Q8IXQ3 194 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 RPRMLQ8N4K4 120 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 TMEM251Q8N6I4 163 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 OR5M9Q8NGP3 310 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 OR5M3Q8NGP4 307 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 CHTF18Q8WVB6 975 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 ASB5Q8WWX0 329 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 RND1Q92730 232 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 REPS1Q96D71 796 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 ART5Q96L15 291 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 SMC6Q96SB8 1091 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 SPOCK3Q9BQ16 436 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 VPS11Q9H270 941 aa19.54■□□□□ 0.72
CHRNB1-206ENST00000574054 IL1RL2Q9HB29 575 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms