RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 ZCCHC7Q8N3Z6 543 aaKnown RBP20.19■□□□□ 0.82
UBFD1-210ENST00000571064 C1orf52Q8N6N3 182 aaKnown RBP20.19■□□□□ 0.82
UBFD1-210ENST00000571064 CLEC1AQ8NC01 280 aa20.19■□□□□ 0.82
UBFD1-210ENST00000571064 C11orf24Q96F05 449 aaPredicted RBP20.19■□□□□ 0.82
UBFD1-210ENST00000571064 PEX11GQ96HA9 241 aa20.19■□□□□ 0.82
UBFD1-210ENST00000571064 MAPKAP1Q9BPZ7 522 aa20.19■□□□□ 0.82
UBFD1-210ENST00000571064 CENPKQ9BS16 269 aa20.19■□□□□ 0.82
UBFD1-210ENST00000571064 TGIF2Q9GZN2 237 aa20.19■□□□□ 0.82
UBFD1-210ENST00000571064 ROGDIQ9GZN7 287 aa20.19■□□□□ 0.82
UBFD1-210ENST00000571064 COPS7BQ9H9Q2 264 aaPredicted RBP20.19■□□□□ 0.82
UBFD1-210ENST00000571064 CLK4Q9HAZ1 481 aaKnown RBP20.19■□□□□ 0.82
UBFD1-210ENST00000571064 MKKSQ9NPJ1 570 aaPredicted RBP20.19■□□□□ 0.82
UBFD1-210ENST00000571064 ZNF282Q9UDV7 671 aaPredicted RBP20.19■□□□□ 0.82
UBFD1-210ENST00000571064 CSAG2Q9Y5P2 127 aa20.19■□□□□ 0.82
UBFD1-210ENST00000571064 NUP210LQ5VU65 1888 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 NPIPB8E9PQR5 432 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 FAM227AF5H4B4 570 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 SLC28A1O00337 649 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 BMP10O95393 424 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 CHEK2O96017 543 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 KLK1P06870 262 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 ZGLP1P0C6A0 271 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 PRPH2P23942 346 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 TSFMP43897 325 aaKnown RBP20.18■□□□□ 0.82
UBFD1-210ENST00000571064 XCR1P46094 333 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 LIM2P55344 173 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 SKP1P63208 163 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 SLAMF1Q13291 335 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 MRM1Q6IN84 353 aaKnown RBP20.18■□□□□ 0.82
UBFD1-210ENST00000571064 RGS9BPQ6ZS82 235 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 SHISA6Q6ZSJ9 500 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 NUDT13Q86X67 352 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 DDIASQ8IXT1 998 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 FER1L6-AS2Q96M78 137 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 RBCK1Q9BYM8 510 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 SOX17Q9H6I2 414 aaPredicted RBP20.18■□□□□ 0.82
UBFD1-210ENST00000571064 WDR54Q9H977 334 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 LANCL2Q9NS86 450 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 NMRK1Q9NWW6 199 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 AHSPQ9NZD4 102 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 GIMAP2Q9UG22 337 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 DAPP1Q9UN19 280 aa20.18■□□□□ 0.82
UBFD1-210ENST00000571064 A0A088AWK7 358 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 OR2W5A6NFC9 320 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 RSL1D1O76021 490 aaKnown RBP20.17■□□□□ 0.82
UBFD1-210ENST00000571064 UMODP07911 640 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 ZNF10P21506 573 aaPredicted RBP20.17■□□□□ 0.82
UBFD1-210ENST00000571064 HNRNPH2P55795 449 aaKnown RBP20.17■□□□□ 0.82
UBFD1-210ENST00000571064 KIAA0040Q15053 153 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 PDCD2Q16342 344 aaPredicted RBP20.17■□□□□ 0.82
UBFD1-210ENST00000571064 IMPG1Q17R60 797 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 PRSS58Q8IYP2 241 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 TMEM52Q8NDY8 209 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 FAM76AQ8TAV0 307 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 TM9SF4Q92544 642 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 MIEF2Q96C03 454 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 C7orf26Q96N11 449 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 CSF3RQ99062 836 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 LYRM4Q9HD34 91 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 MARCOQ9UEW3 520 aaPredicted RBP20.17■□□□□ 0.82
UBFD1-210ENST00000571064 ADAM29Q9UKF5 820 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 PADI2Q9Y2J8 665 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 PTRH2Q9Y3E5 179 aaKnown RBP20.17■□□□□ 0.82
UBFD1-210ENST00000571064 ASB4Q9Y574 426 aa20.17■□□□□ 0.82
UBFD1-210ENST00000571064 RGS14O43566 566 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 HNRNPFP52597 415 aaKnown RBP20.16■□□□□ 0.82
UBFD1-210ENST00000571064 RAB38P57729 211 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 GUCY1A3Q02108 690 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 OCA2Q04671 838 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 KLC1Q07866 573 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 SSPNQ14714 243 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 SPDYAQ5MJ70 313 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 OR2Y1Q8NGV0 311 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 TBC1D20Q96BZ9 403 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 IP6K3Q96PC2 410 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 RUBCNLQ9H714 662 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 SIRT5Q9NXA8 310 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 FAM53CQ9NYF3 392 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 ATG4BQ9Y4P1 393 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 CELSR1Q9NYQ6 3014 aa20.16■□□□□ 0.82
UBFD1-210ENST00000571064 ATP6AP2A0A1C7CYW4 349 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 CYR61O00622 381 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 PEX12O00623 359 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 ZNF195O14628 629 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 LSM1O15116 133 aaKnown RBP20.15■□□□□ 0.82
UBFD1-210ENST00000571064 ATP6AP2O75787 350 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 FHP07954 510 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 KITP10721 976 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 RNH1P13489 461 aaKnown RBP20.15■□□□□ 0.82
UBFD1-210ENST00000571064 GALNT18Q6P9A2 607 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 FAM47EQ6ZV65 393 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 MAVSQ7Z434 540 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 FJX1Q86VR8 437 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 WDR75Q8IWA0 830 aaKnown RBP20.15■□□□□ 0.82
UBFD1-210ENST00000571064 HOMEZQ8IX15 550 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 GRHL3Q8TE85 626 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 UCN3Q969E3 161 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 FCRL1Q96LA6 429 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 PPP1R36Q96LQ0 422 aa20.15■□□□□ 0.82
UBFD1-210ENST00000571064 MESP1Q9BRJ9 268 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms