RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 MIEF2Q96C03 454 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 SPDL1Q96EA4 605 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 C11orf24Q96F05 449 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZBED6CLQ96FA7 236 aaPredicted RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PEX11GQ96HA9 241 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 GBP5Q96PP8 586 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 BBS4Q96RK4 519 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CSF3RQ99062 836 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 DUSP26Q9BV47 211 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 AICDAQ9GZX7 198 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 CLMPQ9H6B4 373 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 RPF2Q9H7B2 306 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 NEUROD4Q9HD90 331 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRTFDC1Q9NRG1 225 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 THSD1Q9NS62 852 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAM120CQ9NX05 1096 aaKnown RBP6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 UTS2RQ9UKP6 389 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PCDHGB4Q9UN71 923 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 ATG4BQ9Y4P1 393 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PCDHGA8Q9Y5G5 932 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PCDHGA3Q9Y5H0 932 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 PCDHA9Q9Y5H5 950 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 AK5Q9Y6K8 562 aa6.21□□□□□ -1.42
CTDNEP1-204ENST00000570484 OTOGLQ3ZCN5 2332 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 A0A1W2PR48 441 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PMS2P1A4D2B8 440 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 GLOD5A6NK44 160 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 MRASO14807 208 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PROM1O43490 865 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 RRP9O43818 475 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR10H2O60403 315 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 B4GALT2O60909 372 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRKRAO75569 313 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 BMP10O95393 424 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 MED26O95402 600 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANP32DO95626 131 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 IFNA16P05015 189 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PGRP06401 933 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 HEXBP07686 556 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 SNRPB2P08579 225 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 CD63P08962 238 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 FURINP09958 794 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 SMIM10L1P0DMW3 83 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ESRRAP11474 423 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 GPX3P22352 226 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRDX6P30041 224 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 RORAP35398 523 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 FOLR3P41439 243 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 NUDT2P50583 147 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 HSD17B7P56937 341 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 C21orf58P58505 322 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 STX5Q13190 355 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PDE7AQ13946 482 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 RUNX2Q13950 521 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 NFYCQ13952 458 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 NCF4Q15080 339 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 MAPKAPK3Q16644 382 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 SYT16Q17RD7 645 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 SPDYE7PQ495Y7 208 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 MLIPQ5VWP3 458 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 C18orf63Q68DL7 685 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 MRM1Q6IN84 353 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANKRD26P1Q6NSI1 321 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC48A1Q6P1K1 146 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANGPTL8Q6UXH0 198 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 DNAJC14Q6Y2X3 702 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 RIPOR1Q6ZS17 1223 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 MSANTD1Q6ZTZ1 278 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 CAMKMTQ7Z624 323 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 BTLAQ7Z6A9 289 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PRSS58Q8IYP2 241 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 NLGN4XQ8N0W4 816 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 LRRC25Q8N386 305 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 DTWD1Q8N5C7 304 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 TRIML2Q8N7C3 387 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PCYOX1LQ8NBM8 494 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 NLGN4YQ8NFZ3 816 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR7A2PQ8NGA2 310 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR4K14Q8NGD5 310 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR4A15Q8NGL6 344 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 RP9Q8TA86 221 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 METTL21AQ8WXB1 218 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 TANKQ92844 425 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PMEPA1Q969W9 287 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 TM4SF18Q96CE8 201 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF764Q96H86 408 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 SMIM10Q96HG1 83 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ITCHQ96J02 903 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC45A3Q96JT2 553 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 EGLN2Q96KS0 407 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 LRFN5Q96NI6 719 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR52E6Q96RD3 313 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PELOQ9BRX2 385 aaKnown RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 TUBB6Q9BUF5 446 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 CRB3Q9BUF7 120 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 B3GNT4Q9C0J1 378 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 BHLHE41Q9C0J9 482 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms