RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 MORN4Q8NDC4 146 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 OR14A16Q8NHC5 309 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 AGAP11Q8TF27 550 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 PTPMT1Q8WUK0 201 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 NCLNQ969V3 563 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 RBM18Q96H35 190 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 SMC6Q96SB8 1091 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 UTP23Q9BRU9 249 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 CLMPQ9H6B4 373 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 ASF1BQ9NVP2 202 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 VPS29Q9UBQ0 182 aa12.89□□□□□ -0.35
HERPUD1-218ENST00000569569 TRBV11-1A0A0K0K1C0 115 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 SERTM1A2A2V5 107 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 GABRR3A8MPY1 467 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 C17orf105B2RV13 164 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 UBFD1O14562 309 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 MAN1A2O60476 641 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 TRIM13O60858 407 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 GUCY1B2O75343 617 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 PRKRAO75569 313 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 GPR75O95800 540 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 NR2F6P10588 404 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 COX7A2P14406 83 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 CD96P40200 585 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 STT3AP46977 705 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 MLF1P58340 268 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 FOLH1Q04609 750 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 GALNT1Q10472 559 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 TBL3Q12788 808 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 TUBA3CQ13748 450 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 TUBA3EQ6PEY2 450 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 COMMD6Q7Z4G1 85 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 C10orf107Q8IVU9 208 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 ARMC10Q8N2F6 343 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 GBP7Q8N8V2 638 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 HBEGFQ99075 208 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 BARD1Q99728 777 aaKnown RBP12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 AGPAT4Q9NRZ5 378 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 SENP1Q9P0U3 644 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 TIMM22Q9Y584 194 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 GTF3C1Q12789 2109 aa12.88□□□□□ -0.35
HERPUD1-218ENST00000569569 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 GLOD5A6NK44 160 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 WASHC1A8K0Z3 465 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 FCHO1O14526 889 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 DYRK3O43781 588 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 PRAMEF2O60811 474 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 SPAG7O75391 227 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 ZFAND5O76080 213 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 AIFM1O95831 613 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 ALOX15P16050 662 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 MAPK12P53778 367 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 PLIN5Q00G26 463 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 ZNF844Q08AG5 666 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 ASPHQ12797 758 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 PCLAFQ15004 111 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 INAQ16352 499 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 KRT71Q3SY84 523 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 FAM219BQ5XKK7 198 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 OR52E8Q6IFG1 317 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 ST13P4Q8IZP2 240 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 C1orf52Q8N6N3 182 aaKnown RBP12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 HORMAD2Q8N7B1 307 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 TCP10LQ8TDR4 215 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 CHTF18Q8WVB6 975 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 FAM111AQ96PZ2 611 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 KCNA7Q96RP8 456 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 PELOQ9BRX2 385 aaKnown RBP12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 OR8D2Q9GZM6 311 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 TEX10Q9NXF1 929 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 ANKRD10Q9NXR5 420 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 ZNF223Q9UK11 482 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 NTNG1Q9Y2I2 539 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 PCDHGB6Q9Y5F9 930 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 HIVEP3Q5T1R4 2406 aa12.87□□□□□ -0.35
HERPUD1-218ENST00000569569 RELNP78509 3460 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 POLEQ07864 2286 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 TCP11X1B4DZS4 312 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 PGRMC2O15173 223 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 RGS16O15492 202 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 DDAH2O95865 285 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 PIK3R1P27986 724 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 CYB561P49447 251 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 HTR6P50406 440 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 ST13P50502 369 aaKnown RBP12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 FOXA1P55317 472 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 TRA2BP62995 288 aaKnown RBP12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 OC90Q02509 493 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 OR1C1Q15619 314 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 ZNF766Q5HY98 468 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 NDUFAF5Q5TEU4 345 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 SPINK14Q6IE38 97 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 FAM180AQ6UWF9 173 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 HSDL2Q6YN16 418 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 MDS2Q8NDY4 140 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 OR8K3Q8NH51 312 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 SLC2A12Q8TD20 617 aa12.86□□□□□ -0.35
HERPUD1-218ENST00000569569 GRHL3Q8TE85 626 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms