RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 GFERP55789 205 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 DSTNP60981 165 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ZXDAP98168 799 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CDK6Q00534 326 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 FADDQ13158 208 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 VEZF1Q14119 521 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CYP27C1Q4G0S4 372 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 SNAP47Q5SQN1 464 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 TMTC4Q5T4D3 741 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 IRAK1BP1Q5VVH5 260 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 LYSMD4Q5XG99 296 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 MRM1Q6IN84 353 aaKnown RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 TMEM107Q6UX40 140 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ZDHHC21Q8IVQ6 265 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 C19orf47Q8N9M1 422 aaKnown RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 OR5T3Q8NGG3 340 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 NT5CQ8TCD5 201 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 SPPL2AQ8TCT8 520 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 TMBIM1Q969X1 311 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 HSH2DQ96JZ2 352 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 AMDHD1Q96NU7 426 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 BTBD9Q96Q07 612 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 YIPF4Q9BSR8 244 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 SEMA6CQ9H3T2 930 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ANKRA2Q9H9E1 313 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 TMEM74BQ9NUR3 256 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ADPRHL2Q9NX46 363 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 LRIT1Q9P2V4 623 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 PSME2Q9UL46 239 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 MAGED1Q9Y5V3 778 aaPredicted RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 M0QX08 132 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 AGRPO00253 132 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ZSCAN9O15535 394 aaPredicted RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 SUV39H1O43463 412 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 BCHEP06276 602 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CTSBP07858 339 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 GNSP15586 552 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CSNK2A2P19784 350 aaPredicted RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 TLX1P31314 330 aaPredicted RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 MPIP34949 423 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CAPZBP47756 277 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ID2Q02363 134 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CSTF1Q05048 431 aaKnown RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 PDK3Q15120 406 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 C14orf28Q4W4Y0 310 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 CWF19L1Q69YN2 538 aaKnown RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 SLC48A1Q6P1K1 146 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 GPR155Q7Z3F1 870 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ZDHHC13Q8IUH4 622 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 SHISA5Q8N114 240 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 EID3Q8N140 333 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 HORMAD2Q8N7B1 307 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 Q8N9G6 341 aaPredicted RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 SMYD1Q8NB12 490 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 OR5D16Q8NGK9 328 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ZFP28Q8NHY6 868 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 XAGE5Q8WWM1 108 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 TM4SF19Q96DZ7 209 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 THAP11Q96EK4 314 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 SERINC2Q96SA4 455 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CSF3RQ99062 836 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 TRIM4Q9C037 500 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 CHST8Q9H2A9 424 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 RAD21L1Q9H4I0 556 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 EQTNQ9NQ60 294 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 FSCN3Q9NQT6 498 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 C1GALT1Q9NS00 363 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ACSS1Q9NUB1 689 aaPredicted RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 LYARQ9NX58 379 aaKnown RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 EHD3Q9NZN3 535 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 NAALAD2Q9Y3Q0 740 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 TP53BP1Q12888 1972 aaPredicted RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 G3V2T6 193 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 NME6O75414 186 aaPredicted RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 TNFRSF21O75509 655 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 TNFRSF1BP20333 461 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 PCGF2P35227 344 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 HSPA13P48723 471 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 ARRB1P49407 418 aaPredicted RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 LIM2P55344 173 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 DUSP2Q05923 314 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 RUNX2Q13950 521 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 GK3PQ14409 553 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMG1-215ENST00000568239 CYBRD1Q53TN4 286 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 CMPK2Q5EBM0 449 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 PPP4R4Q6NUP7 873 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 TMEM154Q6P9G4 183 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 TBPL2Q6SJ96 375 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 USP53Q70EK8 1073 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 GATAD2AQ86YP4 633 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 HS3ST5Q8IZT8 346 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 OR52E4Q8NGH9 312 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 OR9A2Q8NGT5 310 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 DOK4Q8TEW6 326 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 CYGBQ8WWM9 190 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 PIGKQ92643 395 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 KAT2AQ92830 837 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SPATA9Q9BWV2 254 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms