RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, human

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBFD1-208	ENST00000567264	IDO1	P14902	403 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	PIK3R1	P27986	724 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	RPL3	P39023	403 aa	Known RBP	21.31	■■□□□ 1
UBFD1-208	ENST00000567264	EFNA3	P52797	238 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	ID2	Q02363	134 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	FOLH1	Q04609	750 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	SERTAD2	Q14140	314 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	UGT8	Q16880	541 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	TMEM198	Q66K66	360 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	OR4N5	Q8IXE1	308 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	KDF1	Q8NAX2	398 aa	Predicted RBP	21.31	■■□□□ 1
UBFD1-208	ENST00000567264	OR4K14	Q8NGD5	310 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	NACC2	Q96BF6	587 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	KLHL29	Q96CT2	875 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	REEP4	Q9H6H4	257 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	C5AR2	Q9P296	337 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	MAPRE3	Q9UPY8	281 aa		21.31	■■□□□ 1
UBFD1-208	ENST00000567264	APC2	O95996	2303 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	IGKV3D-11	A0A0A0MRZ8	115 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	CDC14C	A4D256	554 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	TAF4	O00268	1085 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	DDX5	P17844	614 aa	Known RBP	21.3	■■□□□ 1
UBFD1-208	ENST00000567264	WT1	P19544	449 aa	Predicted RBP	21.3	■■□□□ 1
UBFD1-208	ENST00000567264	DRD4	P21917	467 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	CLDN8	P56748	225 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	BIK	Q13323	160 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	GSTA3	Q16772	222 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	TMEM205	Q6UW68	189 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	CCDC81	Q6ZN84	652 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	R3HCC1L	Q7Z5L2	792 aa	Known RBP	21.3	■■□□□ 1
UBFD1-208	ENST00000567264	PPP1R32	Q7Z5V6	425 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	TICAM1	Q8IUC6	712 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	ANKRD9	Q96BM1	317 aa	Predicted RBP	21.3	■■□□□ 1
UBFD1-208	ENST00000567264	MARK4	Q96L34	752 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	IP6K3	Q96PC2	410 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	ALOXE3	Q9BYJ1	711 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	DPY30	Q9C005	99 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	GIMAP4	Q9NUV9	329 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	UTS2R	Q9UKP6	389 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	CES1P1	Q9UKY3	287 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	TRIM33	Q9UPN9	1127 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	SSUH2	Q9Y2M2	353 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	HS3ST3B1	Q9Y662	390 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	ZNF780B	Q9Y6R6	833 aa		21.3	■■□□□ 1
UBFD1-208	ENST00000567264	TCRBV16S1A1N1	A0A5B0	115 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	WASHC1	A8K0Z3	465 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	PEX12	O00623	359 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	EFS	O43281	561 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	ERAL1	O75616	437 aa	Known RBP	21.29	■■□□□ 1
UBFD1-208	ENST00000567264	FURIN	P09958	794 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	PRPS1L1	P21108	318 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	UCN	P55089	124 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	OR4D2	P58180	307 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	STX1B	P61266	288 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	TLE3	Q04726	772 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	LANCL3	Q6ZV70	420 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	SPATA21	Q7Z572	469 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	ANKRD37	Q7Z713	158 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	EXOSC8	Q96B26	276 aa	Known RBP	21.29	■■□□□ 1
UBFD1-208	ENST00000567264	PPCDC	Q96CD2	204 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	MTERF3	Q96E29	417 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	CATSPER2	Q96P56	530 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	ELAC2	Q9BQ52	826 aa	Known RBP	21.29	■■□□□ 1
UBFD1-208	ENST00000567264	EXO1	Q9UQ84	846 aa	Known RBP	21.29	■■□□□ 1
UBFD1-208	ENST00000567264	ENTPD4	Q9Y227	616 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	GPR45	Q9Y5Y3	372 aa		21.29	■■□□□ 1
UBFD1-208	ENST00000567264	ACACA	Q13085	2346 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264		A0A087WV48	116 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	TGFBR3L	H3BV60	316 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	SCAMP2	O15127	329 aa	Known RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	NKX2-8	O15522	239 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	IFNA16	P05015	189 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	PRKAR1A	P10644	381 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	XK	P51811	444 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	IGLV3-21	P80748	117 aa	Predicted RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	EEF1A2	Q05639	463 aa	Known RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	PDCD4	Q53EL6	469 aa	Known RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	CRTC2	Q53ET0	693 aa	Predicted RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	CPEB2	Q7Z5Q1	589 aa	Known RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	MTERF4	Q7Z6M4	381 aa	Known RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	MRGPRE	Q86SM8	312 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	SAMD14	Q8IZD0	417 aa	Predicted RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	ADAMTS17	Q8TE56	1095 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	C8orf44	Q96CB5	159 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	DGAT2	Q96PD7	388 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	PRPF18	Q99633	342 aa	Known RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	PELO	Q9BRX2	385 aa	Known RBP	21.28	■■□□□ 1
UBFD1-208	ENST00000567264	BRINP2	Q9C0B6	783 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	EPN3	Q9H201	632 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	SH3BP4	Q9P0V3	963 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	CLDN16	Q9Y5I7	305 aa		21.28	■■□□□ 1
UBFD1-208	ENST00000567264	LOC102723996	A0A087X1L8	192 aa		21.27	■■□□□ 1
UBFD1-208	ENST00000567264	MYOCOS	A0A1B0GUC4	107 aa		21.27	■■□□□ 1
UBFD1-208	ENST00000567264	SRRM3	A6NNA2	597 aa	Predicted RBP	21.27	■■□□□ 1
UBFD1-208	ENST00000567264	SOCS6	O14544	535 aa		21.27	■■□□□ 1
UBFD1-208	ENST00000567264	OR10H2	O60403	315 aa		21.27	■■□□□ 1
UBFD1-208	ENST00000567264	TBX19	O60806	448 aa		21.27	■■□□□ 1
UBFD1-208	ENST00000567264	SHOX2	O60902	331 aa	Predicted RBP	21.27	■■□□□ 1
UBFD1-208	ENST00000567264	COX7A2	P14406	83 aa		21.27	■■□□□ 1
UBFD1-208	ENST00000567264	ITPKB	P27987	946 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms