RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CCZ1BP86790 482 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 CCZ1P86791 482 aaPredicted RBP3.93□□□□□ -1.78
LINC00560-201ENST00000564593 HSPA14Q0VDF9 509 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 PDK1Q15118 436 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 TRADDQ15628 312 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 MLF2Q15773 248 aaPredicted RBP3.93□□□□□ -1.78
LINC00560-201ENST00000564593 PKN2Q16513 984 aaKnown RBP3.93□□□□□ -1.78
LINC00560-201ENST00000564593 MRGPRG-AS1Q2M3A8 158 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 MPPE1Q53F39 396 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 CNSTQ6PJW8 725 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 ZNF730Q6ZMV8 503 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 GDPGP1Q6ZNW5 385 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 ADAMTSL2Q86TH1 951 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 ZFAND4Q86XD8 727 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 OR4N5Q8IXE1 308 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 ZNF619Q8N2I2 560 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 KIAA1524Q8TCG1 905 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 TCP11Q8WWU5 503 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 LGMNQ99538 433 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 MCRIP2Q9BUT9 160 aaKnown RBP3.93□□□□□ -1.78
LINC00560-201ENST00000564593 FUNDC2Q9BWH2 189 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 XPO4Q9C0E2 1151 aaKnown RBP3.93□□□□□ -1.78
LINC00560-201ENST00000564593 SLC26A1Q9H2B4 701 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 IL1RAPQ9NPH3 570 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 GDF3Q9NR23 364 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 TECRQ9NZ01 308 aaKnown RBP3.93□□□□□ -1.78
LINC00560-201ENST00000564593 NUDT4Q9NZJ9 180 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 ODF2LQ9ULJ1 636 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 LRRC9Q6ZRR7 1453 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 EHBP1L1Q8N3D4 1523 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 SAMD9Q5K651 1589 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 HECW1Q76N89 1606 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 PBRM1Q86U86 1689 aa3.93□□□□□ -1.78
LINC00560-201ENST00000564593 POLA1P09884 1462 aaPredicted RBP3.92□□□□□ -1.78
LINC00560-201ENST00000564593 CASKIN1Q8WXD9 1431 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 IGHV3-38A0A0C4DH36 116 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 OR5H15A6NDH6 313 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 TMCO5BA8MYB1 307 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 KRT86O43790 486 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 IDH3BO43837 385 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 KIAA0513O60268 411 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 OR6A2O95222 327 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 ALPPP05187 535 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 CCDC192P0DO97 292 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 ALPPL2P10696 532 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 PCP11498 1178 aaKnown RBP3.92□□□□□ -1.78
LINC00560-201ENST00000564593 GAP43P17677 238 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 MARCKSP29966 332 aaPredicted RBP3.92□□□□□ -1.78
LINC00560-201ENST00000564593 FCGR2BP31994 310 aaPredicted RBP3.92□□□□□ -1.78
LINC00560-201ENST00000564593 FCGR2CP31995 323 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 ALDH3B1P43353 468 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 LUMP51884 338 aaPredicted RBP3.92□□□□□ -1.78
LINC00560-201ENST00000564593 STARD6P59095 220 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 KRT81Q14533 505 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 KNOP1Q1ED39 458 aaKnown RBP3.92□□□□□ -1.78
LINC00560-201ENST00000564593 EPC2Q52LR7 807 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 RTL6Q6ICC9 239 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 TBC1D10CQ8IV04 446 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 WDR49Q8IV35 697 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 LEMD2Q8NC56 503 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 OR52E1Q8NGJ3 308 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 OR6F1Q8NGZ6 308 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 GTF3AQ92664 365 aaKnown RBP3.92□□□□□ -1.78
LINC00560-201ENST00000564593 RPGRIP1Q96KN7 1286 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 GPR137Q96N19 417 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 ALKBH3Q96Q83 286 aaPredicted RBP3.92□□□□□ -1.78
LINC00560-201ENST00000564593 COPS7AQ9UBW8 275 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 FAM153AQ9UHL3 310 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 NARFQ9UHQ1 456 aa3.92□□□□□ -1.78
LINC00560-201ENST00000564593 SH3PXD2BA1X283 911 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 KRT87PA6NCN2 255 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 YJEFN3A6XGL0 299 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 TRAFD1O14545 582 aaPredicted RBP3.91□□□□□ -1.78
LINC00560-201ENST00000564593 CHEK1O14757 476 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 REC8O95072 547 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 SERPINF2P08697 491 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 CD1DP15813 335 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 CRYBA2P53672 197 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 NFATC2Q13469 925 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 UPP1Q16831 310 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 CCDC92Q53HC0 331 aaPredicted RBP3.91□□□□□ -1.78
LINC00560-201ENST00000564593 NKAIN2Q5VXU1 208 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 NEPROQ6NW34 567 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 Q8NBF4 154 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 GOLGA5Q8TBA6 731 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.91□□□□□ -1.78
LINC00560-201ENST00000564593 MRPL24Q96A35 216 aaKnown RBP3.91□□□□□ -1.78
LINC00560-201ENST00000564593 RAB39BQ96DA2 213 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 MOCOSQ96EN8 888 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 PRICKLE1Q96MT3 831 aaPredicted RBP3.91□□□□□ -1.78
LINC00560-201ENST00000564593 AGAP3Q96P47 875 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 RAB40CQ96S21 281 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 ZNF577Q9BSK1 485 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 CXXC4Q9H2H0 198 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 PARLQ9H300 379 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 KCNN3Q9UGI6 736 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 ERRFI1Q9UJM3 462 aaPredicted RBP3.91□□□□□ -1.78
LINC00560-201ENST00000564593 DNPEPQ9ULA0 475 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 CCPG1Q9ULG6 757 aa3.91□□□□□ -1.78
LINC00560-201ENST00000564593 RNF215Q9Y6U7 377 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms