RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 STX4Q12846 297 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 CUL3Q13618 768 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 SERTAD2Q14140 314 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 FAM219BQ5XKK7 198 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 NCCRP1Q6ZVX7 275 aaPredicted RBP14.84□□□□□ -0.03
LMX1B-204ENST00000561065 PAGE2Q7Z2X7 111 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 CYP4Z2PQ8N1L4 340 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 TMEM132CQ8N3T6 1108 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 ANKRD9Q96BM1 317 aaPredicted RBP14.84□□□□□ -0.03
LMX1B-204ENST00000561065 WDR41Q9HAD4 459 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 VTI1BQ9UEU0 232 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 TBK1Q9UHD2 729 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 PHF11Q9UIL8 331 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 PPT2Q9UMR5 302 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 SNX6Q9UNH7 406 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 H3BQF6 201 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF354AO60765 605 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 GLRA3O75311 464 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 GUCY1B2O75343 617 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 MLYCDO95822 493 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 IFNA16P05015 189 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 PYGBP11216 843 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 ATP5F1P24539 256 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 GRNP28799 593 aaKnown RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 PTGER1P34995 402 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 BUD31P41223 144 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 MEOX1P50221 254 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 NR0B1P51843 470 aaKnown RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 HNRNPH2P55795 449 aaKnown RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 RPS13P62277 151 aaKnown RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 HERVK_113P63132 956 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 IFFO1Q0D2I5 559 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 EMBQ6PCB8 327 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 CYP20A1Q6UW02 462 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 Q6ZPB1 254 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 FAM98AQ8NCA5 519 aaKnown RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 DAZLQ92904 295 aaKnown RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 MTERF1Q99551 399 aaKnown RBP14.83□□□□□ -0.04
LMX1B-204ENST00000561065 ERVK-6Q9BXR3 956 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 ALOXE3Q9BYJ1 711 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 ELOVL6Q9H5J4 265 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 DEPPQ9NTK1 212 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 CLCA3PQ9Y6N3 262 aa14.83□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF407Q9C0G0 2248 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 A0A0G2JMM0 328 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 A0A1W2PPB8 328 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 A0A1W2PRS3 328 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 ARHGAP10A1A4S6 786 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 KIR3DP1A8MWS1 328 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 ESPNB1AK53 854 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 OR7A17O14581 309 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 ASNA1O43681 348 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 OR2J2O76002 312 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 SUPT7LO94864 414 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 OR6B1O95007 311 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 COX7A2P14406 83 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 IMPDH1P20839 514 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 CPN2P22792 545 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 SSR4P51571 173 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 HK2P52789 917 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 GPR85P60893 370 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 IGLV3-21P80748 117 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-204ENST00000561065 RBPJQ06330 500 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 SLAMF1Q13291 335 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 CDSNQ15517 529 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.82□□□□□ -0.04
LMX1B-204ENST00000561065 CCDC153Q494R4 210 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 FRG2Q64ET8 278 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 DGAT2L6Q6ZPD8 337 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 SULF2Q8IWU5 870 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 OR4N5Q8IXE1 308 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 RIBC1Q8N443 379 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-204ENST00000561065 OR52B6Q8NGF0 335 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 OR14A16Q8NHC5 309 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 WDR20Q8TBZ3 569 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 SLC2A12Q8TD20 617 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 TANKQ92844 425 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 TMEM125Q96AQ2 219 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 RBM18Q96H35 190 aaKnown RBP14.82□□□□□ -0.04
LMX1B-204ENST00000561065 MAGED4Q96JG8 741 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 CDK15Q96Q40 435 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 FRG2BQ96QU4 278 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 RASL10BQ96S79 203 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 C1QTNF3Q9BXJ4 246 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 OR8D2Q9GZM6 311 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 IQCGQ9H095 443 aaKnown RBP14.82□□□□□ -0.04
LMX1B-204ENST00000561065 LYARQ9NX58 379 aaKnown RBP14.82□□□□□ -0.04
LMX1B-204ENST00000561065 MID2Q9UJV3 735 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 PCTPQ9UKL6 214 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 KLF13Q9Y2Y9 288 aaPredicted RBP14.82□□□□□ -0.04
LMX1B-204ENST00000561065 RNF11Q9Y3C5 154 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 CSMD2Q7Z408 3487 aa14.82□□□□□ -0.04
LMX1B-204ENST00000561065 ADGRG4Q8IZF6 3080 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 PINLYPA6NC86 204 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 C17orf105B2RV13 164 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 PRSS44E7EML9 344 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 HRKO00198 91 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 WWP2O00308 870 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 TMPRSS11DO60235 418 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 EEDO75530 441 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms