RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 OPRM1P35372 400 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 TGM3Q08188 693 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 CRYMQ14894 314 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 KCTD19Q17RG1 926 aaPredicted RBP17.04■□□□□ 0.32
TPM1-226ENST00000560959 RASGEF1CQ8N431 466 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 NAT8LQ8N9F0 302 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 SMPDL3BQ92485 455 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 CCT6BQ92526 530 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 SENP5Q96HI0 755 aaPredicted RBP17.04■□□□□ 0.32
TPM1-226ENST00000560959 TIMP4Q99727 224 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 PIP5K1AQ99755 562 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 YIPF4Q9BSR8 244 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 ROGDIQ9GZN7 287 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 PRDM14Q9GZV8 571 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 SLC6A15Q9H2J7 730 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 PRDM7Q9NQW5 492 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 CHCHD2Q9Y6H1 151 aaPredicted RBP17.04■□□□□ 0.32
TPM1-226ENST00000560959 EML6Q6ZMW3 1958 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 ETHE1O95571 254 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 IGKV3-11P04433 115 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 COX7A2P14406 83 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 CTSSP25774 331 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 CRYZQ08257 329 aaKnown RBP17.03■□□□□ 0.32
TPM1-226ENST00000560959 DUSP8Q13202 625 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 SLBPQ14493 270 aaKnown RBP eCLIP17.03■□□□□ 0.32
TPM1-226ENST00000560959 TBCELQ5QJ74 424 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 FAM45BPQ6NSW5 357 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 PRSS57Q6UWY2 283 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 CAPN12Q6ZSI9 719 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 SRFBP1Q8NEF9 429 aaKnown RBP17.03■□□□□ 0.32
TPM1-226ENST00000560959 FAM45AQ8TCE6 357 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 NAT9Q9BTE0 207 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 EPB41L4BQ9H329 900 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 EHD1Q9H4M9 534 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 COPS7BQ9H9Q2 264 aaPredicted RBP17.03■□□□□ 0.32
TPM1-226ENST00000560959 IKZF3Q9UKT9 509 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 CSPG4Q6UVK1 2322 aa17.03■□□□□ 0.32
TPM1-226ENST00000560959 C15orf38-AP3S2A0A0A6YYH1 394 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 MBD3L4A6NDZ8 208 aaPredicted RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 MBD3L3A6NE82 208 aaPredicted RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 MBD3L5A6NJ08 208 aaPredicted RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 LDB3O75112 727 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 FBXO45P0C2W1 286 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 CERS1P27544 350 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 SERPINB3P29508 390 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 KCNC1P48547 511 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 IGLV3-21P80748 117 aaPredicted RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 NHSL2Q5HYW2 709 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 SPANXN3Q5MJ09 141 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 CXXC5Q7LFL8 322 aaKnown RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 SIMC1Q8NDZ2 872 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 MBD3L2Q8NHZ7 208 aaPredicted RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 SREK1Q8WXA9 508 aaKnown RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 ISL2Q96A47 359 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 ANKRD9Q96BM1 317 aaPredicted RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 NTNG2Q96CW9 530 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 ART5Q96L15 291 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 RUNDC3BQ96NL0 473 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 KCNC2Q96PR1 638 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 BDH2Q9BUT1 245 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 CALHM2Q9HA72 323 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.02■□□□□ 0.32
TPM1-226ENST00000560959 TRMT1Q9NXH9 659 aaKnown RBP17.02■□□□□ 0.32
TPM1-226ENST00000560959 GPRC5BQ9NZH0 403 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 OARD1Q9Y530 152 aa17.02■□□□□ 0.32
TPM1-226ENST00000560959 MYOCOSA0A1B0GUC4 107 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 CES2O00748 559 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 DYRK3O43781 588 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 TRIM3O75382 744 aaPredicted RBP17.01■□□□□ 0.31
TPM1-226ENST00000560959 SLC6A12P48065 614 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 TRPC1P48995 793 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 TEDDM1Q5T9Z0 273 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 PRAMEF20Q5VT98 475 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 VASNQ6EMK4 673 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 TTC27Q6P3X3 843 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 SYDE1Q6ZW31 735 aaPredicted RBP17.01■□□□□ 0.31
TPM1-226ENST00000560959 VN1R5Q7Z5H4 357 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 C9orf40Q8IXQ3 194 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 NKAPQ8N5F7 415 aaKnown RBP17.01■□□□□ 0.31
TPM1-226ENST00000560959 EGFL8Q99944 293 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 TBCDQ9BTW9 1192 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 DOHHQ9BU89 302 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 CNOT11Q9UKZ1 510 aaKnown RBP17.01■□□□□ 0.31
TPM1-226ENST00000560959 SPACA6W5XKT8 324 aa17.01■□□□□ 0.31
TPM1-226ENST00000560959 KDM4EB2RXH2 506 aaPredicted RBP17■□□□□ 0.31
TPM1-226ENST00000560959 WDR47O94967 919 aa17■□□□□ 0.31
TPM1-226ENST00000560959 HPNP05981 417 aa17■□□□□ 0.31
TPM1-226ENST00000560959 ZNF37AP17032 561 aaPredicted RBP17■□□□□ 0.31
TPM1-226ENST00000560959 STT3AP46977 705 aa17■□□□□ 0.31
TPM1-226ENST00000560959 NTRK2Q16620 822 aa17■□□□□ 0.31
TPM1-226ENST00000560959 P3H2Q8IVL5 708 aa17■□□□□ 0.31
TPM1-226ENST00000560959 PPIL6Q8IXY8 311 aa17■□□□□ 0.31
TPM1-226ENST00000560959 PIGTQ969N2 578 aa17■□□□□ 0.31
TPM1-226ENST00000560959 MAGOHBQ96A72 148 aaKnown RBP17■□□□□ 0.31
TPM1-226ENST00000560959 RHBDF1Q96CC6 855 aa17■□□□□ 0.31
TPM1-226ENST00000560959 CERS2Q96G23 380 aa17■□□□□ 0.31
TPM1-226ENST00000560959 RBM18Q96H35 190 aaKnown RBP17■□□□□ 0.31
TPM1-226ENST00000560959 MAPKAP1Q9BPZ7 522 aa17■□□□□ 0.31
TPM1-226ENST00000560959 ZNF490Q9ULM2 529 aaPredicted RBP17■□□□□ 0.31
TPM1-226ENST00000560959 A0A1W2PPR1 153 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms